4XIH image
Deposition Date 2015-01-07
Release Date 2016-06-29
Last Version Date 2024-01-10
Entry Detail
PDB ID:
4XIH
Keywords:
Title:
Crystal structure of the R116A mutant AhpE from Mycobacterium tuberculosis
Biological Source:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.25 Å
R-Value Free:
0.22
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
I 4
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:AhpC/TSA family protein
Mutations:R116A
Chain IDs:A, B
Chain Length:153
Number of Molecules:2
Biological Source:Mycobacterium tuberculosis (strain CCDC5079)
Primary Citation
The active site architecture in peroxiredoxins: a case study on Mycobacterium tuberculosis AhpE.
Chem.Commun.(Camb.) 52 10293 10296 (2016)
PMID: 27471753 DOI: 10.1039/c6cc02645a

Abstact

Peroxiredoxins catalyze the reduction of peroxides, a process of vital importance to survive oxidative stress. A nucleophilic cysteine, also known as the peroxidatic cysteine, is responsible for this catalytic process. We used the Mycobacterium tuberculosis alkyl hydroperoxide reductase E (MtAhpE) as a model to investigate the effect of the chemical environment on the specificity of the reaction. Using an integrative structural (R116A - PDB ; F37H - PDB), kinetic and computational approach, we explain the mutational effects of key residues in its environment. This study shows that the active site residues are specifically oriented to create an environment which selectively favours a reaction with peroxides.

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