4XDA image
Deposition Date 2014-12-19
Release Date 2015-03-04
Last Version Date 2024-03-20
Entry Detail
PDB ID:
4XDA
Keywords:
TRANSFERASE
Title:
Vibrio cholerae O395 Ribokinase complexed with Ribose, ADP and Sodium ion.
Biological Source:
Source Organism:
Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) (Taxon ID: 345073)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.75 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 1
4XDA validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ribokinase
Chain IDs:A, B, C, D
Chain Length:309
Number of Molecules:4
Biological Source:Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
UniProt ID:A0A0H2UL04 Pfam ID:PF00294
Ligand Molecules
ADP
NA
RIB
Primary Citation
Crystal Structure of Apo and Ligand Bound Vibrio cholerae Ribokinase (Vc-RK): Role of Monovalent Cation Induced Activation and Structural Flexibility in Sugar Phosphorylation
Adv.Exp.Med.Biol. 842 293 307 (2015)
PMID: 25408351 DOI: 10.1007/978-3-319-11280-0_19
Primary Citation of related structures
4X8F
4XCK