4XBD image
Deposition Date 2014-12-16
Release Date 2015-03-25
Last Version Date 2024-11-13
Entry Detail
PDB ID:
4XBD
Title:
1.45A resolution structure of Norovirus 3CL protease complex with a covalently bound dipeptidyl inhibitor (1R,2S)-2-({N-[(benzyloxy)carbonyl]-3-cyclohexyl-L-alanyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid (Orthorhombic P Form)
Biological Source:
Method Details:
Experimental Method:
Resolution:
1.45 Å
R-Value Free:
0.19
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:3C-LIKE PROTEASE
Gene (Uniprot):ORF1
Chain IDs:A, B
Chain Length:188
Number of Molecules:2
Biological Source:Norwalk virus (strain GI/Human/United States/Norwalk/1968)
Ligand Molecules
Primary Citation
Structure-Guided Design and Optimization of Dipeptidyl Inhibitors of Norovirus 3CL Protease. Structure-Activity Relationships and Biochemical, X-ray Crystallographic, Cell-Based, and In Vivo Studies.
J.Med.Chem. 58 3144 3155 (2015)
PMID: 25761614 DOI: 10.1021/jm5019934

Abstact

Norovirus infection constitutes the primary cause of acute viral gastroenteritis. There are currently no vaccines or norovirus-specific antiviral therapeutics available for the management of norovirus infection. Norovirus 3C-like protease is essential for viral replication, consequently, inhibition of this enzyme is a fruitful avenue of investigation that may lead to the emergence of antinorovirus therapeutics. We describe herein the optimization of dipeptidyl inhibitors of norovirus 3C-like protease using iterative SAR, X-ray crystallographic, and enzyme and cell-based studies. We also demonstrate herein in vivo efficacy of an inhibitor using the murine model of norovirus infection.

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Primary Citation of related structures