4X6Z image
Deposition Date 2014-12-09
Release Date 2015-12-23
Last Version Date 2024-01-10
Entry Detail
PDB ID:
4X6Z
Keywords:
HYDROLASE
Title:
Yeast 20S proteasome in complex with PR-VI modulator
Biological Source:
Source Organism:
synthetic construct (Taxon ID: 32630)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Taxon ID: 559292)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.70 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1 21 1
4X6Z validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Proteasome subunit beta type-6
Gene (Uniprot):PRE7
Chain IDs:A (auth: 1), O (auth: M)
Chain Length:241
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P23724 Pfam ID:PF00227
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Proteasome subunit beta type-7
Gene (Uniprot):PRE4
Chain IDs:B (auth: 2), P (auth: N)
Chain Length:266
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P30657 Pfam ID:PF00227
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Proteasome subunit alpha type-1
Gene (Uniprot):SCL1
Chain IDs:C (auth: A), Q (auth: O)
Chain Length:252
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P21243 Pfam ID:PF10584, PF00227 EC:3.4.25.1
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Proteasome subunit alpha type-2
Gene (Uniprot):PRE8
Chain IDs:D (auth: B), R (auth: P)
Chain Length:250
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P23639 Pfam ID:PF10584, PF00227
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Proteasome subunit alpha type-3
Gene (Uniprot):PRE9
Chain IDs:E (auth: C), S (auth: Q)
Chain Length:258
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P23638 Pfam ID:PF10584, PF00227
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Proteasome subunit alpha type-4
Gene (Uniprot):PRE6
Chain IDs:F (auth: D), T (auth: R)
Chain Length:254
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P40303 Pfam ID:PF10584, PF00227
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Proteasome subunit alpha type-5
Gene (Uniprot):PUP2
Chain IDs:G (auth: E), U (auth: S)
Chain Length:13
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P32379 Pfam ID:PF10584, PF00227
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Proteasome subunit alpha type-6
Gene (Uniprot):PRE5
Chain IDs:H (auth: F), V (auth: T)
Chain Length:234
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P40302 Pfam ID:PF10584, PF00227
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Probable proteasome subunit alpha type-7
Gene (Uniprot):PRE10
Chain IDs:I (auth: G), W (auth: U)
Chain Length:288
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P21242 Pfam ID:PF10584, PF00227
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Proteasome subunit beta type-1
Gene (Uniprot):PRE3
Chain IDs:J (auth: H), X (auth: V)
Chain Length:215
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P38624 Pfam ID:PF00227 EC:3.4.25.1
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Proteasome subunit beta type-2
Gene (Uniprot):PUP1
Chain IDs:K (auth: I), Y (auth: W)
Chain Length:261
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P25043 Pfam ID:PF00227, PF12465
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Proteasome subunit beta type-3
Gene (Uniprot):PUP3
Chain IDs:L (auth: J), Z (auth: X)
Chain Length:205
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P25451 Pfam ID:PF00227
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Proteasome subunit beta type-4
Gene (Uniprot):PRE1
Chain IDs:M (auth: K), AA (auth: Y)
Chain Length:198
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P22141 Pfam ID:PF00227
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Proteasome subunit beta type-5
Gene (Uniprot):PRE2
Chain IDs:N (auth: L), BA (auth: Z)
Chain Length:287
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P30656 Pfam ID:PF00227
Polymer Type:polypeptide(L)
Molecule:synthetic peptide (polymer)
Chain IDs:CA (auth: a), DA (auth: e)
Chain Length:252
Number of Molecules:2
Biological Source:synthetic construct
Ligand Molecules
GOL
MG
MPD
Primary Citation
Crystal structures revealed the common place of binding of low-molecular mass activators with the 20S proteasome
To Be Published ? ? ? (?)
Primary Citation of related structures
4X6Z