4X6C image
Deposition Date 2014-12-08
Release Date 2015-01-28
Last Version Date 2024-10-16
Entry Detail
PDB ID:
4X6C
Keywords:
Title:
CD1a ternary complex with lysophosphatidylcholine and BK6 TCR
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.23
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:T-cell surface glycoprotein CD1a
Gene (Uniprot):CD1A
Chain IDs:A, C
Chain Length:281
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta-2-microglobulin
Gene (Uniprot):B2M
Chain IDs:B, D
Chain Length:105
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TCR alpha
Chain IDs:E, G
Chain Length:207
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TCR beta
Chain IDs:F, H
Chain Length:245
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
alpha beta T cell antigen receptor recognition of CD1a presenting self lipid ligands.
Nat.Immunol. 16 258 266 (2015)
PMID: 25642819 DOI: 10.1038/ni.3098

Abstact

A central paradigm in αβ T cell-mediated immunity is the simultaneous co-recognition of antigens and antigen-presenting molecules by the αβ T cell antigen receptor (TCR). CD1a presents a broad repertoire of lipid-based antigens. We found that a prototypical autoreactive TCR bound CD1a when it was presenting a series of permissive endogenous ligands, while other lipid ligands were nonpermissive to TCR binding. The structures of two TCR-CD1a-lipid complexes showed that the TCR docked over the A' roof of CD1a in a manner that precluded direct contact with permissive ligands. Nonpermissive ligands indirectly inhibited TCR binding by disrupting the TCR-CD1a contact zone. The exclusive recognition of CD1a by the TCR represents a previously unknown mechanism whereby αβ T cells indirectly sense self antigens that are bound to an antigen-presenting molecule.

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Primary Citation of related structures