4WJV image
Deposition Date 2014-10-01
Release Date 2014-11-19
Last Version Date 2024-01-10
Entry Detail
PDB ID:
4WJV
Keywords:
Title:
Crystal structure of Rsa4 in complex with the Nsa2 binding peptide
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.20 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Ribosome assembly protein 4
Gene (Uniprot):RSA4
Chain IDs:A, B, C, D
Chain Length:381
Number of Molecules:4
Biological Source:Saccharomyces cerevisiae
Polymer Type:polypeptide(L)
Molecule:Maltose-binding periplasmic protein
Gene (Uniprot):malE
Chain IDs:E, F, G, H
Chain Length:381
Number of Molecules:4
Biological Source:Escherichia coli
Polymer Type:polypeptide(L)
Molecule:Ribosome biogenesis protein NSA2
Gene (Uniprot):NSA2
Chain IDs:I, J, K, L
Chain Length:22
Number of Molecules:4
Biological Source:Saccharomyces cerevisiae
Ligand Molecules
Peptide-like Molecules
PRD_900001
Primary Citation
A network of assembly factors is involved in remodeling rRNA elements during preribosome maturation.
J.Cell Biol. 207 481 498 (2014)
PMID: 25404745 DOI: 10.1083/jcb.201408111

Abstact

Eukaryotic ribosome biogenesis involves ∼200 assembly factors, but how these contribute to ribosome maturation is poorly understood. Here, we identify a network of factors on the nascent 60S subunit that actively remodels preribosome structure. At its hub is Rsa4, a direct substrate of the force-generating ATPase Rea1. We show that Rsa4 is connected to the central protuberance by binding to Rpl5 and to ribosomal RNA (rRNA) helix 89 of the nascent peptidyl transferase center (PTC) through Nsa2. Importantly, Nsa2 binds to helix 89 before relocation of helix 89 to the PTC. Structure-based mutations of these factors reveal the functional importance of their interactions for ribosome assembly. Thus, Rsa4 is held tightly in the preribosome and can serve as a "distribution box," transmitting remodeling energy from Rea1 into the developing ribosome. We suggest that a relay-like factor network coupled to a mechano-enzyme is strategically positioned to relocate rRNA elements during ribosome maturation.

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Primary Citation of related structures