4WD1 image
Entry Detail
PDB ID:
4WD1
Keywords:
Title:
Acetoacetyl-CoA Synthetase from Streptomyces lividans
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2014-09-05
Release Date:
2015-01-28
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 31 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Acetoacetate-CoA ligase
Chain IDs:A
Chain Length:658
Number of Molecules:1
Biological Source:Streptomyces lividans TK24
Primary Citation
The structure of S. lividans acetoacetyl-CoA synthetase shows a novel interaction between the C-terminal extension and the N-terminal domain.
Proteins 83 575 581 (2015)
PMID: 25488501 DOI: 10.1002/prot.24738

Abstact

The adenosine monoposphate-forming acyl-CoA synthetase enzymes catalyze a two-step reaction that involves the initial formation of an acyl adenylate that reacts in a second partial reaction to form a thioester between the acyl substrate and CoA. These enzymes utilize a Domain Alternation catalytic mechanism, whereby a ∼ 110 residue C-terminal domain rotates by 140° to form distinct catalytic conformations for the two partial reactions. The structure of an acetoacetyl-CoA synthetase (AacS) is presented that illustrates a novel aspect of this C-terminal domain. Specifically, several acetyl- and acetoacetyl-CoA synthetases contain a 30-residue extension on the C-terminus compared to other members of this family. Whereas residues from this extension are disordered in prior structures, the AacS structure shows that residues from this extension may interact with key catalytic residues from the N-terminal domain.

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