4WA8 image
Deposition Date 2014-08-28
Release Date 2014-11-12
Last Version Date 2023-09-27
Entry Detail
PDB ID:
4WA8
Keywords:
Title:
Methanopyrus Kandleri FEN-1 nuclease
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Flap endonuclease 1
Gene (Uniprot):fen
Chain IDs:A, B
Chain Length:355
Number of Molecules:2
Biological Source:Methanopyrus kandleri
Ligand Molecules
Primary Citation
Structure and specificity of FEN-1 from Methanopyrus kandleri.
Proteins 83 188 194 (2015)
PMID: 25354467 DOI: 10.1002/prot.24704

Abstact

DNA repair is fundamental to genome stability and is found in all three domains of life. However many archaeal species, such as Methanopyrus kandleri, contain only a subset of the eukaryotic nucleotide excision repair (NER) homologs, and those present often contain significant differences compared to their eukaryotic homologs. To clarify the role of the NER XPG-like protein Mk0566 from M. kandleri, its biochemical activity and three-dimensional structure were investigated. Both were found to be more similar to human FEN-1 than human XPG, suggesting a biological role in replication and long-patch base excision repair rather than in NER.

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Disease

Primary Citation of related structures