4W93 image
Deposition Date 2014-08-27
Release Date 2015-07-15
Last Version Date 2024-11-06
Entry Detail
PDB ID:
4W93
Title:
Human pancreatic alpha-amylase in complex with montbretin A
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.35 Å
R-Value Free:
0.21
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Pancreatic alpha-amylase
Gene (Uniprot):AMY2A
Chain IDs:A
Chain Length:496
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
The amylase inhibitor montbretin A reveals a new glycosidase inhibition motif.
Nat.Chem.Biol. 11 691 696 (2015)
PMID: 26214255 DOI: 10.1038/nchembio.1865

Abstact

The complex plant flavonol glycoside montbretin A is a potent (Ki = 8 nM) and specific inhibitor of human pancreatic α-amylase with potential as a therapeutic for diabetes and obesity. Controlled degradation studies on montbretin A, coupled with inhibition analyses, identified an essential high-affinity core structure comprising the myricetin and caffeic acid moieties linked via a disaccharide. X-ray structural analyses of the montbretin A-human α-amylase complex confirmed the importance of this core structure and revealed a novel mode of glycosidase inhibition wherein internal π-stacking interactions between the myricetin and caffeic acid organize their ring hydroxyls for optimal hydrogen bonding to the α-amylase catalytic residues D197 and E233. This novel inhibitory motif can be reproduced in a greatly simplified analog, offering potential for new strategies for glycosidase inhibition and therapeutic development.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
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