4V93 image
Deposition Date 2014-04-16
Release Date 2014-07-09
Last Version Date 2024-10-23
Entry Detail
PDB ID:
4V93
Keywords:
TRANSPORT PROTEIN
Title:
Fitted coordinates for Lumbricus terrestris hemoglobin cryo-EM complex (EMD-2627)
Biological Source:
Source Organism:
LUMBRICUS TERRESTRIS (Taxon ID: 6398)
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
8.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
4V93 validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:EXTRACELLULAR GLOBIN-3
Chain IDs:A (auth: A0), F (auth: A5), K (auth: AC), P (auth: AH), U (auth: AM), Z (auth: AR), EA (auth: AW), JA (auth: Ab), OA (auth: Ag), TA (auth: Al), YA (auth: Aq), DB (auth: Av)
Chain Length:149
Number of Molecules:12
Biological Source:LUMBRICUS TERRESTRIS
UniProt ID:P11069 Pfam ID:PF00042
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HEMOGLOBIN CHAIN D1
Chain IDs:B (auth: A1), G (auth: A6), L (auth: AD), Q (auth: AI), V (auth: AN), AA (auth: AS), FA (auth: AX), KA (auth: Ac), PA (auth: Ah), UA (auth: Am), ZA (auth: Ar), EB (auth: Aw)
Chain Length:140
Number of Molecules:12
Biological Source:LUMBRICUS TERRESTRIS
UniProt ID:O61233 Pfam ID:PF00042
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:EXTRACELLULAR GLOBIN-4
Chain IDs:C (auth: A2), D (auth: A3), H (auth: A7), I (auth: AA), M (auth: AE), N (auth: AF), R (auth: AJ), S (auth: AK), W (auth: AO), X (auth: AP), BA (auth: AT), CA (auth: AU), GA (auth: AY), HA (auth: AZ), LA (auth: Ad), MA (auth: Ae), QA (auth: Ai), RA (auth: Aj), VA (auth: An), WA (auth: Ao), AB (auth: As), BB (auth: At), FB (auth: Ax), GB (auth: Ay)
Chain Length:147
Number of Molecules:24
Biological Source:LUMBRICUS TERRESTRIS
UniProt ID:P13579 Pfam ID:PF00042
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:EXTRACELLULAR GLOBIN-2
Chain IDs:E (auth: A4), J (auth: AB), O (auth: AG), T (auth: AL), Y (auth: AQ), DA (auth: AV), IA (auth: Aa), NA (auth: Af), SA (auth: Ak), XA (auth: Ap), CB (auth: Au), HB (auth: Az), KB (auth: B2), LB (auth: B3), PB (auth: B7), QB (auth: BA), UB (auth: BE), VB (auth: BF), ZB (auth: BJ), AC (auth: BK), EC (auth: BO), FC (auth: BP), JC (auth: BT), KC (auth: BU), OC (auth: BY), PC (auth: BZ), TC (auth: Bd), UC (auth: Be), YC (auth: Bi), ZC (auth: Bj), DD (auth: Bn), ED (auth: Bo), ID (auth: Bs), JD (auth: Bt), ND (auth: Bx), OD (auth: By)
Chain Length:145
Number of Molecules:36
Biological Source:LUMBRICUS TERRESTRIS
UniProt ID:P02218 Pfam ID:PF00042
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HEMOGLOBIN CHAIN D1
Chain IDs:IB (auth: B0), NB (auth: B5), SB (auth: BC), XB (auth: BH), CC (auth: BM), HC (auth: BR), MC (auth: BW), RC (auth: Bb), WC (auth: Bg), BD (auth: Bl), GD (auth: Bq), LD (auth: Bv), UD (auth: C4), ZD (auth: CB), EE (auth: CG), JE (auth: CL), OE (auth: CQ), TE (auth: CV), YE (auth: Ca), DF (auth: Cf), IF (auth: Ck), NF (auth: Cp), SF (auth: Cu), XF (auth: Cz)
Chain Length:158
Number of Molecules:24
Biological Source:LUMBRICUS TERRESTRIS
UniProt ID:O61233 Pfam ID:PF00042
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:EXTRACELLULAR GLOBIN-4
Chain IDs:JB (auth: B1), OB (auth: B6), TB (auth: BD), YB (auth: BI), DC (auth: BN), IC (auth: BS), NC (auth: BX), SC (auth: Bc), XC (auth: Bh), CD (auth: Bm), HD (auth: Br), MD (auth: Bw)
Chain Length:151
Number of Molecules:12
Biological Source:LUMBRICUS TERRESTRIS
UniProt ID:P13579 Pfam ID:PF00042
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:EXTRACELLULAR GLOBIN-3
Chain IDs:MB (auth: B4), RB (auth: BB), WB (auth: BG), BC (auth: BL), GC (auth: BQ), LC (auth: BV), QC (auth: Ba), VC (auth: Bf), AD (auth: Bk), FD (auth: Bp), KD (auth: Bu), PD (auth: Bz), TD (auth: C3), YD (auth: CA), DE (auth: CF), IE (auth: CK), NE (auth: CP), SE (auth: CU), XE (auth: CZ), CF (auth: Ce), HF (auth: Cj), MF (auth: Co), RF (auth: Ct), WF (auth: Cy)
Chain Length:170
Number of Molecules:24
Biological Source:LUMBRICUS TERRESTRIS
UniProt ID:P11069 Pfam ID:PF00042
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HEMOGLOBIN LINKER CHAIN L1
Chain IDs:QD (auth: C0), VD (auth: C5), AE (auth: CC), FE (auth: CH), KE (auth: CM), PE (auth: CR), UE (auth: CW), ZE (auth: Cb), EF (auth: Cg), JF (auth: Cl), OF (auth: Cq), TF (auth: Cv)
Chain Length:240
Number of Molecules:12
Biological Source:LUMBRICUS TERRESTRIS
UniProt ID:Q9GV76 Pfam ID:PF00057, PF16915
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:EXTRACELLULAR HEMOGLOBIN LINKER L2 SUBUNIT
Chain IDs:RD (auth: C1), WD (auth: C6), BE (auth: CD), GE (auth: CI), LE (auth: CN), QE (auth: CS), VE (auth: CX), AF (auth: Cc), FF (auth: Ch), KF (auth: Cm), PF (auth: Cr), UF (auth: Cw)
Chain Length:288
Number of Molecules:12
Biological Source:LUMBRICUS TERRESTRIS
UniProt ID:Q2I743 Pfam ID:PF00057, PF16915
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:EXTRACELLULAR HEMOGLOBIN LINKER L3 SUBUNIT
Chain IDs:SD (auth: C2), XD (auth: C7), CE, HE (auth: CJ), ME (auth: CO), RE (auth: CT), WE (auth: CY), BF (auth: Cd), GF (auth: Ci), LF (auth: Cn), QF (auth: Cs), VF (auth: Cx)
Chain Length:240
Number of Molecules:12
Biological Source:LUMBRICUS TERRESTRIS
UniProt ID:Q2I742 Pfam ID:PF00057, PF16915
Ligand Molecules
NA
Primary Citation
Structural Basis for Cooperative Oxygen Binding and Bracelet-Assisted Assembly of Lumbricus Terrestris Hemoglobin
To be Published ? ? ? (?)
Primary Citation of related structures
4V93
4CYX
4D0H
4D0I