4V6W image
Deposition Date 2013-02-27
Release Date 2014-07-09
Last Version Date 2024-05-15
Entry Detail
PDB ID:
4V6W
Keywords:
RIBOSOME
Title:
Structure of the D. melanogaster 80S ribosome
Biological Source:
Source Organism:
Drosophila melanogaster (Taxon ID: 7227)
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
6.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
4V6W validation report
Macromolecular Entities
Polymer Type:polyribonucleotide
Molecule:28S ribosomal RNA
Chain IDs:EC (auth: A5)
Chain Length:3970
Number of Molecules:1
Biological Source:Drosophila melanogaster
Polymer Type:polyribonucleotide
Molecule:5S ribosomal RNA
Chain IDs:GC (auth: A7)
Chain Length:120
Number of Molecules:1
Biological Source:Drosophila melanogaster
Polymer Type:polyribonucleotide
Molecule:5.8S ribosomal RNA
Chain IDs:HC (auth: A8)
Chain Length:123
Number of Molecules:1
Biological Source:Drosophila melanogaster
Polymer Type:polyribonucleotide
Molecule:2S ribosomal RNA
Chain IDs:FC (auth: A9)
Chain Length:30
Number of Molecules:1
Biological Source:Drosophila melanogaster
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein SA
Gene (Uniprot):sta
Chain IDs:P (auth: AA)
Chain Length:114
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P38979 Pfam ID:PF00318, PF16122
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S3a
Gene (Uniprot):RpS3A
Chain IDs:O (auth: AB)
Chain Length:84
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P55830 Pfam ID:PF01015
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S2
Gene (Uniprot):RpS2
Chain IDs:BA (auth: AC)
Chain Length:267
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P31009 Pfam ID:PF00333, PF03719
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S3
Gene (Uniprot):RpS3
Chain IDs:W (auth: AD)
Chain Length:246
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q06559 Pfam ID:PF07650, PF00189
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S4
Gene (Uniprot):RpS4
Chain IDs:AA (auth: AE)
Chain Length:261
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P41042 Pfam ID:PF08071, PF01479, PF00900, PF00467, PF16121
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S5a
Gene (Uniprot):RpS5a
Chain IDs:DA (auth: AF)
Chain Length:80
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q24186 Pfam ID:PF00177
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S6
Gene (Uniprot):RpS6
Chain IDs:CA (auth: AG)
Chain Length:248
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P29327 Pfam ID:PF01092
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S7
Gene (Uniprot):RpS7
Chain IDs:EA (auth: AH)
Chain Length:121
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9VA91 Pfam ID:PF01251
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S8
Gene (Uniprot):RpS8
Chain IDs:GA (auth: AI)
Chain Length:208
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q8MLY8 Pfam ID:PF01201
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S9
Gene (Uniprot):RpS9
Chain IDs:Z (auth: AJ)
Chain Length:195
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P55935 Pfam ID:PF00163, PF01479
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S10a
Gene (Uniprot):RpS10a
Chain IDs:D (auth: AK)
Chain Length:163
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9VB14 Pfam ID:PF03501
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S11
Gene (Uniprot):RpS11
Chain IDs:K (auth: AL)
Chain Length:155
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q0E9B6 Pfam ID:PF16205, PF00366
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S12
Gene (Uniprot):RpS12
Chain IDs:G (auth: AM)
Chain Length:139
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P80455 Pfam ID:PF01248
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S13
Gene (Uniprot):RpS13
Chain IDs:J (auth: AN)
Chain Length:151
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q03334 Pfam ID:PF08069, PF00312
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S14
Chain IDs:E (auth: AO)
Chain Length:151
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:C0HKA0 Pfam ID:PF00411
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S15, isoform A
Gene (Uniprot):RpS15
Chain IDs:M (auth: AP)
Chain Length:148
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q7JZW2 Pfam ID:PF00203
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S16
Gene (Uniprot):RpS16
Chain IDs:HA (auth: AQ)
Chain Length:148
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9W237 Pfam ID:PF00380
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S17
Gene (Uniprot):RpS17
Chain IDs:L (auth: AR)
Chain Length:131
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P17704 Pfam ID:PF00833
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S18
Gene (Uniprot):RpS18
Chain IDs:H (auth: AS)
Chain Length:152
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P41094 Pfam ID:PF00416
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S19a
Gene (Uniprot):RpS19a
Chain IDs:N (auth: AT)
Chain Length:156
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P39018 Pfam ID:PF01090
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S20
Gene (Uniprot):RpS20
Chain IDs:C (auth: AU)
Chain Length:120
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P55828 Pfam ID:PF00338
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S21
Gene (Uniprot):RpS21
Chain IDs:Q (auth: AV)
Chain Length:83
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:O76927 Pfam ID:PF01249
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S15Aa
Gene (Uniprot):RpS15Aa
Chain IDs:FA (auth: AW)
Chain Length:130
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P48149 Pfam ID:PF00410
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S23
Gene (Uniprot):RpS23
Chain IDs:F (auth: AX)
Chain Length:143
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q8T3U2 Pfam ID:PF00164
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S24
Gene (Uniprot):RpS24
Chain IDs:R (auth: AY)
Chain Length:131
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9W229 Pfam ID:PF01282
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S25
Gene (Uniprot):RpS25
Chain IDs:S (auth: AZ)
Chain Length:844
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P48588 Pfam ID:PF03297
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S26
Gene (Uniprot):RpS26
Chain IDs:T (auth: Aa)
Chain Length:114
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P13008 Pfam ID:PF01283
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S27
Gene (Uniprot):RpS27
Chain IDs:U (auth: Ab)
Chain Length:84
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9VBU9 Pfam ID:PF01667
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S28
Gene (Uniprot):RpS28b
Chain IDs:V (auth: Ac)
Chain Length:267
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9W334 Pfam ID:PF01200
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S29
Gene (Uniprot):RpS29
Chain IDs:I (auth: Ad)
Chain Length:246
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9VH69 Pfam ID:PF00253
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S30, isoform A
Gene (Uniprot):RpS30
Chain IDs:X (auth: Ae)
Chain Length:261
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9VDH8 Pfam ID:PF04758
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S27a
Gene (Uniprot):RpS27A
Chain IDs:Y (auth: Af)
Chain Length:80
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P15357 Pfam ID:PF01599
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein subunit beta-like protein
Gene (Uniprot):Rack1
Chain IDs:B (auth: Ag)
Chain Length:248
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:O18640 Pfam ID:PF00400
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Vig2, isoform B
Gene (Uniprot):vig2
Chain IDs:IA (auth: Ah)
Chain Length:121
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9VBX3 Pfam ID:PF04774
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Elongation factor 2
Gene (Uniprot):eEF2
Chain IDs:A (auth: Az)
Chain Length:844
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P13060 Pfam ID:PF00009, PF03144, PF14492, PF03764, PF00679
Polymer Type:polyribonucleotide
Molecule:18S ribosomal RNA
Chain IDs:JA (auth: B2)
Chain Length:1995
Number of Molecules:1
Biological Source:Drosophila melanogaster
Polymer Type:polyribonucleotide
Molecule:E-tRNA
Chain IDs:KA (auth: BC)
Chain Length:75
Number of Molecules:1
Biological Source:Drosophila melanogaster
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L8
Gene (Uniprot):RpL8
Chain IDs:YA (auth: CA)
Chain Length:149
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9V3G1 Pfam ID:PF00181, PF03947
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L3
Gene (Uniprot):RpL3
Chain IDs:KB (auth: CB)
Chain Length:76
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:O16797 Pfam ID:PF00297
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L4
Gene (Uniprot):RpL4
Chain IDs:VB (auth: CC)
Chain Length:111
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P09180 Pfam ID:PF00573, PF14374
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L5
Gene (Uniprot):RpL5
Chain IDs:VA (auth: CD)
Chain Length:299
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9W5R8 Pfam ID:PF17144, PF14204
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L6, isoform A
Gene (Uniprot):RpL6
Chain IDs:CC (auth: CE)
Chain Length:243
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9V9W2 Pfam ID:PF03868, PF01159
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L7
Gene (Uniprot):RpL7
Chain IDs:LB (auth: CF)
Chain Length:252
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P32100 Pfam ID:PF08079, PF00327
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L7a
Gene (Uniprot):RpL7A
Chain IDs:DC (auth: CG)
Chain Length:271
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P46223 Pfam ID:PF01248
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L9
Gene (Uniprot):RpL9
Chain IDs:BC (auth: CH)
Chain Length:190
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P50882 Pfam ID:PF00347
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L10
Gene (Uniprot):RpL10
Chain IDs:UA (auth: CI)
Chain Length:115
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:O61231 Pfam ID:PF00252
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L11
Gene (Uniprot):RpL11
Chain IDs:AC (auth: CJ)
Chain Length:93
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P46222 Pfam ID:PF00281, PF00673
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L12
Gene (Uniprot):RpL12
Chain IDs:NA (auth: CK)
Chain Length:70
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9W1B9 Pfam ID:PF03946, PF00298
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L13
Gene (Uniprot):RpL13
Chain IDs:PA (auth: CL)
Chain Length:51
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P41126 Pfam ID:PF01294
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L14
Gene (Uniprot):RpL14
Chain IDs:RA (auth: CM)
Chain Length:166
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P55841 Pfam ID:PF01929
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L15
Gene (Uniprot):RpL15
Chain IDs:TA (auth: CN)
Chain Length:25
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:O17445 Pfam ID:PF00827
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L13a
Gene (Uniprot):RpL13A
Chain IDs:OA (auth: CO)
Chain Length:104
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9VNE9 Pfam ID:PF00572
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L17
Gene (Uniprot):RpL17
Chain IDs:BB (auth: CP)
Chain Length:186
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9W3W8 Pfam ID:PF00237
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L18
Gene (Uniprot):RpL18
Chain IDs:WA (auth: CQ)
Chain Length:223
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9VS34 Pfam ID:PF17135
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L19
Gene (Uniprot):RpL19
Chain IDs:XA (auth: CR)
Chain Length:144
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P36241 Pfam ID:PF01280
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L18a
Gene (Uniprot):RpL18A
Chain IDs:ZA (auth: CS)
Chain Length:177
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P41093 Pfam ID:PF01775
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L21
Gene (Uniprot):RpL21
Chain IDs:AB (auth: CT)
Chain Length:159
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9V9M7 Pfam ID:PF01157
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L22
Gene (Uniprot):RpL22
Chain IDs:CB (auth: CU)
Chain Length:299
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P50887 Pfam ID:PF01776
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L23
Gene (Uniprot):RpL23
Chain IDs:QA (auth: CV)
Chain Length:140
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P48159 Pfam ID:PF00238
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L24
Gene (Uniprot):RpL24
Chain IDs:FB (auth: CW)
Chain Length:155
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9VJY6 Pfam ID:PF01246
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L23A
Gene (Uniprot):RpL23A
Chain IDs:DB (auth: CX)
Chain Length:277
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9W0A8 Pfam ID:PF03939, PF00276
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L26
Gene (Uniprot):RpL26
Chain IDs:EB (auth: CY)
Chain Length:149
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9VVU2 Pfam ID:PF16906, PF00467
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L27
Gene (Uniprot):RpL27
Chain IDs:GB (auth: CZ)
Chain Length:135
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9VBN5 Pfam ID:PF00467, PF01777
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L27a
Gene (Uniprot):RpL27A
Chain IDs:SA (auth: Ca)
Chain Length:149
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P41092 Pfam ID:PF00828
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L29
Gene (Uniprot):RpL29
Chain IDs:JB (auth: Cb)
Chain Length:76
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q24154 Pfam ID:PF01779
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L30
Gene (Uniprot):RpL30
Chain IDs:MB (auth: Cc)
Chain Length:111
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9VJ19 Pfam ID:PF01248
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L31
Gene (Uniprot):RpL31
Chain IDs:NB (auth: Cd)
Chain Length:299
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9V597 Pfam ID:PF01198
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L32
Gene (Uniprot):RpL32
Chain IDs:OB (auth: Ce)
Chain Length:243
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P04359 Pfam ID:PF01655
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L35A
Gene (Uniprot):RpL35A
Chain IDs:PB (auth: Cf)
Chain Length:252
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9VNB9 Pfam ID:PF01247
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L34a
Gene (Uniprot):RpL34a
Chain IDs:QB (auth: Cg)
Chain Length:271
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9VBH8 Pfam ID:PF01199
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L35
Gene (Uniprot):RpL35
Chain IDs:IB (auth: Ch)
Chain Length:190
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9W499 Pfam ID:PF00831
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L36
Gene (Uniprot):RpL36
Chain IDs:RB (auth: Ci)
Chain Length:115
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P49630 Pfam ID:PF01158
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L37-A
Gene (Uniprot):RpL37-1
Chain IDs:SB (auth: Cj)
Chain Length:93
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9VXX8 Pfam ID:PF01907
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L38
Gene (Uniprot):RpL38
Chain IDs:TB (auth: Ck)
Chain Length:70
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9W5N2 Pfam ID:PF01781
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L39
Gene (Uniprot):RpL39
Chain IDs:UB (auth: Cl)
Chain Length:51
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:O16130 Pfam ID:PF00832
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L40
Gene (Uniprot):RpL40
Chain IDs:WB (auth: Cm)
Chain Length:166
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P18101 Pfam ID:PF01020
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L41
Gene (Uniprot):RpL41
Chain IDs:XB (auth: Cn)
Chain Length:25
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q962S2 Pfam ID:PF05162
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L36A
Gene (Uniprot):RpL36A
Chain IDs:ZB (auth: Co)
Chain Length:104
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9VLT7 Pfam ID:PF00935
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L37a
Gene (Uniprot):RpL37A
Chain IDs:YB (auth: Cp)
Chain Length:186
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9VMU4 Pfam ID:PF01780
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S acidic ribosomal protein P0
Chain IDs:MA (auth: Cq)
Chain Length:223
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:P05388 Pfam ID:PF00466, PF17777
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L28
Gene (Uniprot):RpL28
Chain IDs:HB (auth: Cr)
Chain Length:144
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9VZS5 Pfam ID:PF01778
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L10a-2
Gene (Uniprot):RpL10Ab
Chain IDs:LA (auth: Cz)
Chain Length:135
Number of Molecules:1
Biological Source:Drosophila melanogaster
UniProt ID:Q9VTP4 Pfam ID:PF00687
Ligand Molecules
NA
Primary Citation
Structures of the human and Drosophila 80S ribosome.
Nature 497 80 85 (2013)
PMID: 23636399 DOI: 10.1038/nature12104

Abstact

Protein synthesis in all cells is carried out by macromolecular machines called ribosomes. Although the structures of prokaryotic, yeast and protist ribosomes have been determined, the more complex molecular architecture of metazoan 80S ribosomes has so far remained elusive. Here we present structures of Drosophila melanogaster and Homo sapiens 80S ribosomes in complex with the translation factor eEF2, E-site transfer RNA and Stm1-like proteins, based on high-resolution cryo-electron-microscopy density maps. These structures not only illustrate the co-evolution of metazoan-specific ribosomal RNA with ribosomal proteins but also reveal the presence of two additional structural layers in metazoan ribosomes, a well-ordered inner layer covered by a flexible RNA outer layer. The human and Drosophila ribosome structures will provide the basis for more detailed structural, biochemical and genetic experiments.

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Primary Citation of related structures
4V6W
3J38
3J3C
3J39
3J3E
3J3A
3J3D
3J3B
3J3F