4UTF image
Entry Detail
PDB ID:
4UTF
Keywords:
Title:
Structure of the GH99 endo-alpha-mannosidase from Bacteroides xylanisolvens in complex with mannose-alpha-1,3-isofagomine and alpha- 1,2-mannobiose
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2014-07-21
Release Date:
2014-12-24
Method Details:
Experimental Method:
Resolution:
1.30 Å
R-Value Free:
0.13
R-Value Work:
0.11
R-Value Observed:
0.11
Space Group:
I 4
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:GLYCOSYL HYDROLASE FAMILY 71
Chain IDs:A
Chain Length:380
Number of Molecules:1
Biological Source:BACTEROIDES XYLANISOLVENS
Peptide-like Molecules
PRD_900111
Primary Citation

Abstact

Yeasts, which have been a component of the human diet for at least 7,000 years, possess an elaborate cell wall α-mannan. The influence of yeast mannan on the ecology of the human microbiota is unknown. Here we show that yeast α-mannan is a viable food source for the Gram-negative bacterium Bacteroides thetaiotaomicron, a dominant member of the microbiota. Detailed biochemical analysis and targeted gene disruption studies support a model whereby limited cleavage of α-mannan on the surface generates large oligosaccharides that are subsequently depolymerized to mannose by the action of periplasmic enzymes. Co-culturing studies showed that metabolism of yeast mannan by B. thetaiotaomicron presents a 'selfish' model for the catabolism of this difficult to breakdown polysaccharide. Genomic comparison with B. thetaiotaomicron in conjunction with cell culture studies show that a cohort of highly successful members of the microbiota has evolved to consume sterically-restricted yeast glycans, an adaptation that may reflect the incorporation of eukaryotic microorganisms into the human diet.

Legend

Protein

Chemical

Disease

Primary Citation of related structures