4UPB image
Deposition Date 2014-06-15
Release Date 2014-08-20
Last Version Date 2024-05-08
Entry Detail
PDB ID:
4UPB
Keywords:
Title:
Electron cryo-microscopy of the complex formed between the hexameric ATPase RavA and the decameric inducible decarboxylase LdcI
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
11.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:LYSINE DECARBOXYLASE, INDUCIBLE
Gene (Uniprot):cadA
Chain IDs:A, B
Chain Length:715
Number of Molecules:2
Biological Source:ESCHERICHIA COLI K-12
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATPASE RAVA
Gene (Uniprot):ravA
Chain IDs:C, D, E
Chain Length:500
Number of Molecules:3
Biological Source:ESCHERICHIA COLI K-12
Ligand Molecules
Primary Citation
Assembly Principles of a Unique Cage Formed by Hexameric and Decameric E. Coli Proteins.
Elife 3 03653 ? (2014)
PMID: 25097238 DOI: 10.7554/ELIFE.03653

Abstact

A 3.3 MDa macromolecular cage between two Escherichia coli proteins with seemingly incompatible symmetries-the hexameric AAA+ ATPase RavA and the decameric inducible lysine decarboxylase LdcI-is reconstructed by cryo-electron microscopy to 11 Å resolution. Combined with a 7.5 Å resolution reconstruction of the minimal complex between LdcI and the LdcI-binding domain of RavA, and the previously solved crystal structures of the individual components, this work enables to build a reliable pseudoatomic model of this unusual architecture and to identify conformational rearrangements and specific elements essential for complex formation. The design of the cage created via lateral interactions between five RavA rings is unique for the diverse AAA+ ATPase superfamily.

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Primary Citation of related structures
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