ISDA

Deposition Date 2015-03-27

Release Date 2015-06-03

Last Version Date 2024-10-09

Entry Detail

PDB ID:

4UIB

Keywords:

HYDROLASE

Title:

Crystal structure of 3p in complex with tafCPB

Biological Source:

Source Organism:

SUS SCROFA (Taxon ID: 9823)

Host Organism:

PICHIA PASTORIS

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.94 Å

R-Value Free:

0.19

R-Value Work:

0.16

R-Value Observed:

0.16

Space Group:

P 41 21 2

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:CARBOXYPEPTIDASE B
Gene (Uniprot):CPB1
Mutations:YES
Chain IDs:A
Chain Length:307
Number of Molecules:1
Biological Source:SUS SCROFA

UniProt ID:P09955 Pfam ID:PF00246 EC:3.4.17.2

Ligand Molecules

ACT

GOL

GWX

Primary Citation

Novel Small Molecule Inhibitors of Activated Thrombin Activatable Fibrinolysis Inhibitor (Tafia) from Natural Product Anabaenopeptin.

Halland, N, Bronstrup, M, Czech, J, Czechtizky, W, Evers, A, Follmann, M, Kohlmann, M, Schiell, M, Kurz, M, Schreuder, H.A, Kallus, C.Show

J.Med.Chem. 58 4839 ? (2015)

PMID: 25990761 DOI: 10.1021/JM501840B

Abstact

Anabaenopeptins isolated from cyanobacteria were identified as inhibitors of carboxypeptidase TAFIa. Cocrystal structures of these macrocyclic natural product inhibitors in a modified porcine carboxypeptidase B revealed their binding mode and provided the basis for the rational design of small molecule inhibitors with a previously unknown central urea motif. Optimization based on these design concepts allowed for a rapid evaluation of the SAR and delivered potent small molecule inhibitors of TAFIa with a promising overall profile.

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Protein

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Disease

Primary Citation of related structures