4UDE image
Entry Detail
PDB ID:
4UDE
Keywords:
Title:
An oligomerization domain confers pioneer properties to the LEAFY master floral regulator
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2014-12-10
Release Date:
2016-03-02
Method Details:
Experimental Method:
Resolution:
2.25 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 65
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:GINLFY PROTEIN
Chain IDs:A, B
Chain Length:110
Number of Molecules:2
Biological Source:GINKGO BILOBA
Primary Citation
A Sam Oligomerization Domain Shapes the Genomic Binding Landscape of the Leafy Transcription Factor
Nat.Commun. 7 11222 ? (2016)
PMID: 27097556 DOI: 10.1038/NCOMMS11222

Abstact

Deciphering the mechanisms directing transcription factors (TFs) to specific genome regions is essential to understand and predict transcriptional regulation. TFs recognize short DNA motifs primarily through their DNA-binding domain. Some TFs also possess an oligomerization domain suspected to potentiate DNA binding but for which the genome-wide influence remains poorly understood. Here we focus on the LEAFY transcription factor, a master regulator of flower development in angiosperms. We have determined the crystal structure of its conserved amino-terminal domain, revealing an unanticipated Sterile Alpha Motif oligomerization domain. We show that this domain is essential to LEAFY floral function. Moreover, combined biochemical and genome-wide assays suggest that oligomerization is required for LEAFY to access regions with low-affinity binding sites or closed chromatin. This finding shows that domains that do not directly contact DNA can nevertheless have a profound impact on the DNA binding landscape of a TF.

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