4UBD image
Deposition Date 2014-08-12
Release Date 2015-06-24
Last Version Date 2024-11-13
Entry Detail
PDB ID:
4UBD
Title:
Crystal structure of a neutralizing human monoclonal antibody with 1968 H3 HA
Biological Source:
Source Organism:
Influenza A virus (Taxon ID: 506350)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.50 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 31
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin HA1 chain
Gene (Uniprot):HA
Chain IDs:A, B (auth: U), D (auth: I), E (auth: M), F (auth: Q), G (auth: E)
Chain Length:321
Number of Molecules:6
Biological Source:Influenza A virus
Polymer Type:polypeptide(L)
Molecule:monoclonal antibody H chain
Chain IDs:M (auth: C), O (auth: Y), Q (auth: G), S, U (auth: O), W (auth: K)
Chain Length:226
Number of Molecules:6
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:monoclonal antibody L chain
Chain IDs:N (auth: D), P (auth: X), R (auth: H), T, V (auth: P), X (auth: L)
Chain Length:215
Number of Molecules:6
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin HA2 chain
Gene (Uniprot):HA
Chain IDs:C (auth: V), H (auth: F), I (auth: B), J, K (auth: N), L (auth: R)
Chain Length:175
Number of Molecules:6
Biological Source:Influenza A virus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
NAG Y NAG -D
Ligand Molecules
Primary Citation
A potent broad-spectrum protective human monoclonal antibody crosslinking two haemagglutinin monomers of influenza A virus.
Nat Commun 6 7708 7708 (2015)
PMID: 26196962 DOI: 10.1038/ncomms8708

Abstact

Effective annual influenza vaccination requires frequent changes in vaccine composition due to both antigenic shift for different subtype hemagglutinins (HAs) and antigenic drift in a particular HA. Here we present a broadly neutralizing human monoclonal antibody with an unusual binding modality. The antibody, designated CT149, was isolated from convalescent patients infected with pandemic H1N1 in 2009. CT149 is found to neutralize all tested group 2 and some group 1 influenza A viruses by inhibiting low pH-induced, HA-mediated membrane fusion. It promotes killing of infected cells by Fc-mediated antibody-dependent cellular cytotoxicity and complement-dependent cytotoxicity. X-ray crystallographic data reveal that CT149 binds primarily to the fusion domain in HA2, and the light chain is also largely involved in binding. The epitope recognized by this antibody comprises amino-acid residues from two adjacent protomers of HA. This binding characteristic of CT149 will provide more information to support the design of more potent influenza vaccines.

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Primary Citation of related structures