4U6V image
Entry Detail
PDB ID:
4U6V
Keywords:
Title:
Mechanisms of Neutralization of a Human Anti-Alpha Toxin Antibody
Biological Source:
PDB Version:
Deposition Date:
2014-07-29
Release Date:
2014-09-17
Method Details:
Experimental Method:
Resolution:
2.56 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Alpha-hemolysin
Chain IDs:C (auth: A), F (auth: B)
Chain Length:293
Number of Molecules:2
Biological Source:Staphylococcus aureus subsp. aureus TCH60
Polymer Type:polypeptide(L)
Description:Fab, antigen binding fragment, heavy chain
Chain IDs:A (auth: H), D (auth: K)
Chain Length:225
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Fab, antigen binding fragment, light chain
Chain IDs:B (auth: L), E (auth: M)
Chain Length:213
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Mechanisms of Neutralization of a Human Anti-alpha-toxin Antibody.
J.Biol.Chem. 289 29874 29880 (2014)
PMID: 25210036 DOI: 10.1074/jbc.M114.601328

Abstact

MEDI4893 is a neutralizing human monoclonal antibody that targets α-toxin (AT) and is currently undergoing evaluation in the field of Staphylococcus aureus-mediated diseases. We have solved the crystal structure of MEDI4893 Fab bound to monomeric AT at a resolution of 2.56 Å and further characterized its epitope using various engineered AT variants. We have found that MEDI4893 recognizes a novel epitope in the so-called "rim" domain of AT and exerts its neutralizing effect through a dual mechanism. In particular, MEDI4893 not only sterically blocks binding of AT to its cell receptor but also prevents it from adopting a lytic heptameric trans-membrane conformation.

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Primary Citation of related structures