4U3C image
Deposition Date 2014-07-19
Release Date 2015-07-22
Last Version Date 2024-10-16
Entry Detail
PDB ID:
4U3C
Keywords:
Title:
Docking Site of Maltohexaose in the Mtb GlgE
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.98 Å
R-Value Free:
0.25
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase
Gene (Uniprot):glgE
Chain IDs:A, B, C, D, E, F
Chain Length:723
Number of Molecules:6
Biological Source:Mycobacterium tuberculosis
Ligand Molecules
Peptide-like Molecules
PRD_900001
PRD_900035
Primary Citation
Crystal structures of Mycobacterium tuberculosis GlgE and complexes with non-covalent inhibitors.
Sci Rep 5 12830 12830 (2015)
PMID: 26245983 DOI: 10.1038/srep12830

Abstact

GlgE is a bacterial maltosyltransferase that catalyzes the elongation of a cytosolic, branched α-glucan. In Mycobacterium tuberculosis (M. tb), inactivation of GlgE (Mtb GlgE) results in the rapid death of the organism due to a toxic accumulation of the maltosyl donor, maltose-1-phosphate (M1P), suggesting that GlgE is an intriguing target for inhibitor design. In this study, the crystal structures of the Mtb GlgE in a binary complex with maltose and a ternary complex with maltose and a maltosyl-acceptor molecule, maltohexaose, were solved to 3.3 Å and 4.0 Å, respectively. The maltohexaose structure reveals a dominant site for α-glucan binding. To obtain more detailed interactions between first generation, non-covalent inhibitors and GlgE, a variant Streptomyces coelicolor GlgEI (Sco GlgEI-V279S) was made to better emulate the Mtb GlgE M1P binding site. The structure of Sco GlgEI-V279S complexed with α-maltose-C-phosphonate (MCP), a non-hydrolyzable substrate analogue, was solved to 1.9 Å resolution, and the structure of Sco GlgEI-V279S complexed with 2,5-dideoxy-3-O-α-D-glucopyranosyl-2,5-imino-D-mannitol (DDGIM), an oxocarbenium mimic, was solved to 2.5 Å resolution. These structures detail important interactions that contribute to the inhibitory activity of these compounds, and provide information on future designs that may be exploited to improve upon these first generation GlgE inhibitors.

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Disease

Primary Citation of related structures