4U0Z image
Deposition Date 2014-07-14
Release Date 2014-12-10
Last Version Date 2023-12-20
Entry Detail
PDB ID:
4U0Z
Keywords:
Title:
Eukaryotic Fic Domain containing protein with bound APCPP
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.95 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Adenosine monophosphate-protein transferase FICD
Gene (Uniprot):FICD
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:344
Number of Molecules:8
Biological Source:Homo sapiens
Primary Citation
Crystal structure of the human, FIC-domain containing protein HYPE and implications for its functions.
Structure 22 1831 1843 (2014)
PMID: 25435325 DOI: 10.1016/j.str.2014.10.007

Abstact

Protein AMPylation, the transfer of AMP from ATP to protein targets, has been recognized as a new mechanism of host-cell disruption by some bacterial effectors that typically contain a FIC-domain. Eukaryotic genomes also encode one FIC-domain protein,HYPE, which has remained poorly characterized.Here we describe the structure of human HYPE, solved by X-ray crystallography, representing the first structure of a eukaryotic FIC-domain protein. We demonstrate that HYPE forms stable dimers with structurally and functionally integrated FIC-domains and with TPR-motifs exposed for protein-protein interactions. As HYPE also uniquely possesses a transmembrane helix, dimerization is likely to affect its positioning and function in the membrane vicinity. The low rate of auto AMPylation of the wild-type HYPE could be due to autoinhibition, consistent with the mechanism proposed for a number of putative FIC AMPylators. Our findings also provide a basis to further consider possible alternative cofactors of HYPE and distinct modes of target-recognition.

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