4TYP image
Deposition Date 2014-07-09
Release Date 2014-11-26
Last Version Date 2023-11-08
Entry Detail
PDB ID:
4TYP
Keywords:
TRANSFERASE
Title:
Crystal structure of an adenylate kinase mutant--AKm1
Biological Source:
Source Organism:
Bacillus subtilis 168 (Taxon ID: 224308)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.90 Å
R-Value Free:
0.32
R-Value Work:
0.28
R-Value Observed:
0.28
Space Group:
P 1 21 1
4TYP validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Adenylate kinase
Gene (Uniprot):adk
Mutations:L3I, G17A, R19K, E22A, D23K, K69R, G73S, D75S, Y103M, K105R, P106K, I107L, D108E, Y109H, N112H, D106R, K107Q, D108E, V109E, S169A, T179M, Q180K, D184A, S187D, E188S, G190E, Y191V, A193R, Q198E, I201M, Q202E, D203K, Y205F, A206K, V208L, K209R, D210E, G213Q, K216A, K217R
Chain IDs:A (auth: C), B, C (auth: A), D
Chain Length:217
Number of Molecules:4
Biological Source:Bacillus subtilis 168
UniProt ID:P16304 Pfam ID:PF00406, PF05191 EC:2.7.4.3
Ligand Molecules
AP5
ZN
Primary Citation
Crystal structures of thermally stable adenylate kinase mutants designed by local structural entropy optimization and structure-guided mutagenesis
J KOREAN SOC APPL BIOL CHEM 57 661 665 (2014)
DOI: 10.1007/s13765-014-4228-4
Primary Citation of related structures
4MKG
4TYQ