4TR0 image
Deposition Date 2014-06-13
Release Date 2014-10-01
Last Version Date 2024-11-13
Entry Detail
PDB ID:
4TR0
Keywords:
Title:
Crystal structure of GSSG-bound cGrx2
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.95 Å
R-Value Free:
0.19
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Glutaredoxin 3
Gene (Uniprot):Clos_2422
Chain IDs:A, B
Chain Length:93
Number of Molecules:2
Biological Source:Alkaliphilus oremlandii
Primary Citation
The GSH- and GSSG-bound structures of glutaredoxin from Clostridium oremlandii.
Arch.Biochem.Biophys. 564C 20 25 (2014)
PMID: 25218089 DOI: 10.1016/j.abb.2014.09.001

Abstact

Glutaredoxin (Grx) is a major redox enzyme that reduces disulfide bonds using glutathione (GSH) as an electron donor. The anaerobic bacterium Clostridium oremlandii possesses a selenocysteine-containing Grx (cGrx1) and a cysteine-containing homolog (cGrx2). Here, the crystal structure of the GSSG-bound form of cGrx2 was determined for the first time at a resolution of 1.95Å. In addition, its monothiol variant cGrx2/C15S in complex with GSH was also determined at a resolution of 1.58Å. cGrx2 is a monomeric protein with an overall structure that consists of the typical thioredoxin fold composed of four α-helices and four β-strands. Two ligands, GSH and GSSG, share a conserved binding site consisting of CPYC, TVP, and CDD motifs. The cysteinyl and γ-glutamyl moieties show similar binding interactions in the two structures, whereas the glycine moiety shows different interactions. Interestingly, the structures revealed that only one GSH moiety of GSSG is sufficient for its binding to the protein. The GSSG-bound structure of cGrx2 was obtained as an oxidized form with a disulfide bond at the CPYC motif. Comparison of the GSH-binding mode in cGrx2 to other known Grxs revealed similarities as well as some diversity.

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