4TNU image
Entry Detail
PDB ID:
4TNU
Keywords:
Title:
Human brain aspartoacylase mutant Y231C complex with intermediate analog (N-phosphonomethyl-L-aspartate)
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2014-06-05
Release Date:
2014-07-30
Method Details:
Experimental Method:
Resolution:
2.90 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 42 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Aspartoacylase
Mutations:Y231C
Chain IDs:A, B
Chain Length:313
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Aspartoacylase catalytic deficiency as the cause of canavan disease: a structural perspective.
Biochemistry 53 4970 4978 (2014)
PMID: 25003821 DOI: 10.1021/bi500719k

Abstact

Canavan disease (CD) is a fatal, childhood neurological disorder caused by mutations in the ASPA gene, leading to catalytic deficiencies in the aspartoacylase (ASPA) enzyme and impaired N-acetyl-l-aspartic acid metabolism in the brain. To study the possible structural defects triggered by these mutations, four ASPA missense mutations associated with different disease severities have been structurally characterized. These mutant enzymes each have overall structures similar to that of the native ASPA enzyme, but with varying degrees of alterations that offer explanations for the respective loss of catalytic activity. The K213E mutant, a nonconservative mutant associated with a mild disease phenotype, has minimal structural differences compared to the native enzyme. In contrast, the loss of van der Waals contacts in the F295S mutant and the loss of hydrophobic and hydrogen bonding interactions in the Y231C mutant lead to a local collapse of the hydrophobic core structure in the carboxyl-terminal domain, contributing to a decrease in protein stability. The structure of the E285A mutant, the most common clinical mutant, reveals that the loss of hydrogen bonding interactions with the carboxylate side chain of Glu285 disturbs the active site architecture, leading to altered substrate binding and lower catalytic activity. Our improved understanding of the nature of these structural defects provides a basis for the development of treatment therapies for CD.

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Primary Citation of related structures