4TLF image
Entry Detail
PDB ID:
4TLF
Keywords:
Title:
Crystal structure of Thiol dioxygenase from Pseudomonas aeruginosa
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2014-05-29
Release Date:
2015-06-17
Method Details:
Experimental Method:
Resolution:
2.14 Å
R-Value Free:
0.25
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:3-mercaptopropionate dioxygenase
Chain IDs:A, B, C, D
Chain Length:211
Number of Molecules:4
Biological Source:Pseudomonas aeruginosa
Ligand Molecules
Primary Citation
The Cysteine Dioxygenase Homologue from Pseudomonas aeruginosa Is a 3-Mercaptopropionate Dioxygenase.
J.Biol.Chem. 290 24424 24437 (2015)
PMID: 26272617 DOI: 10.1074/jbc.M114.635672

Abstact

Thiol dioxygenation is the initial oxidation step that commits a thiol to important catabolic or biosynthetic pathways. The reaction is catalyzed by a family of specific non-heme mononuclear iron proteins each of which is reported to react efficiently with only one substrate. This family of enzymes includes cysteine dioxygenase, cysteamine dioxygenase, mercaptosuccinate dioxygenase, and 3-mercaptopropionate dioxygenase. Using sequence alignment to infer cysteine dioxygenase activity, a cysteine dioxygenase homologue from Pseudomonas aeruginosa (p3MDO) has been identified. Mass spectrometry of P. aeruginosa under standard growth conditions showed that p3MDO is expressed in low levels, suggesting that this metabolic pathway is available to the organism. Purified recombinant p3MDO is able to oxidize both cysteine and 3-mercaptopropionic acid in vitro, with a marked preference for 3-mercaptopropionic acid. We therefore describe this enzyme as a 3-mercaptopropionate dioxygenase. Mössbauer spectroscopy suggests that substrate binding to the ferrous iron is through the thiol but indicates that each substrate could adopt different coordination geometries. Crystallographic comparison with mammalian cysteine dioxygenase shows that the overall active site geometry is conserved but suggests that the different substrate specificity can be related to replacement of an arginine by a glutamine in the active site.

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Primary Citation of related structures