4S14 image
Entry Detail
PDB ID:
4S14
Keywords:
Title:
Crystal structure of the orphan nuclear receptor RORgamma ligand-binding domain in complex with 4alpha-caboxyl, 4beta-methyl-zymosterol (4ACD8)
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2015-01-07
Release Date:
2015-02-11
Method Details:
Experimental Method:
Resolution:
3.54 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 63 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Nuclear receptor ROR-gamma
Chain IDs:A
Chain Length:259
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Nuclear receptor-interacting protein 1
Chain IDs:B (auth: C)
Chain Length:12
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Identification of Natural ROR gamma Ligands that Regulate the Development of Lymphoid Cells.
Cell Metab 21 286 297 (2015)
PMID: 25651181 DOI: 10.1016/j.cmet.2015.01.004

Abstact

Mice deficient in the nuclear hormone receptor RORγt have defective development of thymocytes, lymphoid organs, Th17 cells, and type 3 innate lymphoid cells. RORγt binds to oxysterols derived from cholesterol catabolism, but it is not clear whether these are its natural ligands. Here, we show that sterol lipids are necessary and sufficient to drive RORγt-dependent transcription. We combined overexpression, RNAi, and genetic deletion of metabolic enzymes to study RORγ-dependent transcription. Our results are consistent with the RORγt ligand(s) being a cholesterol biosynthetic intermediate (CBI) downstream of lanosterol and upstream of zymosterol. Analysis of lipids bound to RORγ identified molecules with molecular weights consistent with CBIs. Furthermore, CBIs stabilized the RORγ ligand-binding domain and induced coactivator recruitment. Genetic deletion of metabolic enzymes upstream of the RORγt-ligand(s) affected the development of lymph nodes and Th17 cells. Our data suggest that CBIs play a role in lymphocyte development potentially through regulation of RORγt.

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Primary Citation of related structures