4RZM image
Deposition Date 2014-12-22
Release Date 2015-01-21
Last Version Date 2023-09-20
Entry Detail
PDB ID:
4RZM
Keywords:
Title:
Crystal structure of the Lsd19-lasalocid A complex
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.33 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
I 41 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Epoxide hydrolase LasB
Gene (Uniprot):lsd19
Chain IDs:A, B
Chain Length:283
Number of Molecules:2
Biological Source:Streptomyces lasaliensis
Primary Citation
Epoxide hydrolase-lasalocid a structure provides mechanistic insight into polyether natural product biosynthesis.
J.Am.Chem.Soc. 137 86 89 (2015)
PMID: 25535803 DOI: 10.1021/ja511374k

Abstact

Biosynthesis of some polyether natural products involves a kinetically disfavored epoxide-opening cyclic ether formation, a reaction termed anti-Baldwin cyclization. One such example is the biosynthesis of lasalocid A, an ionophore antibiotic polyether. During lasalocid A biosynthesis, an epoxide hydrolase, Lsd19, converts the bisepoxy polyketide intermediate into the tetrahydrofuranyl-tetrahydropyran product. We report the crystal structure of Lsd19 in complex with lasalocid A. The structure unambiguously shows that the C-terminal domain of Lsd19 catalyzes the intriguing anti-Baldwin cyclization. We propose a general mechanism for epoxide selection by ionophore polyether epoxide hydrolases.

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