4RV2 image
Deposition Date 2014-11-24
Release Date 2015-02-11
Last Version Date 2024-02-28
Entry Detail
PDB ID:
4RV2
Keywords:
Title:
Crystal Structure of (3R)-hydroxyacyl-ACP dehydratase HadAB hetero-dimer from Mycobacterium smegmatis
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.28
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 4 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:UPF0336 protein MSMEG_1340/MSMEI_1302
Gene (Uniprot):MSMEG_1340
Chain IDs:A
Chain Length:146
Number of Molecules:1
Biological Source:Mycobacterium smegmatis str. MC2 155
Polymer Type:polypeptide(L)
Molecule:MaoC family protein
Gene (Uniprot):MSMEG_1341
Chain IDs:B
Chain Length:141
Number of Molecules:1
Biological Source:Mycobacterium smegmatis str. MC2 155
Ligand Molecules
Primary Citation
Crystal structure of dehydratase component HadAB complex of mycobacterial FAS-II pathway.
Biochem.Biophys.Res.Commun. 458 369 374 (2015)
PMID: 25656575 DOI: 10.1016/j.bbrc.2015.01.119

Abstact

Fatty acid biosynthesis type II in mycobacteria delivers the fatty acids required for mycolic acid synthesis. The pathway employs a unique maoC like β-hydroxyacyl-ACP dehydratase HadAB or HadBC heterodimer in the third step of the elongation cycle. Here we report the crystal structure of the HadAB complex determined using a Pb-SIRAS method. Crystal structure aided with enzymatic study establishes the roles of HadA as a scaffolding component and HadB as a catalytic component together indispensable for the activity. The detailed structural analysis of HadAB in combination with MD simulation endorses the spatial orientation of the central hot-dog helix and the dynamic nature of its associated loop in regulation of substrate specificities in dehydratase/hydratase family enzymes.

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Primary Citation of related structures