4RUN image
Deposition Date 2014-11-21
Release Date 2015-04-08
Last Version Date 2024-11-27
Entry Detail
PDB ID:
4RUN
Title:
Crystal structure of human odorant binding protein OBPIIa
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.28
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Odorant-binding protein 2a
Gene (Uniprot):OBP2A
Mutations:C99S, K112N
Chain IDs:A, B
Chain Length:161
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Crystal structure of the human odorant binding protein, OBPIIa.
Proteins 83 1180 1184 (2015)
PMID: 25810031 DOI: 10.1002/prot.24797

Abstact

Human odorant-binding protein, OBPIIa , is expressed by nasal epithelia to facilitate transport of hydrophobic odorant molecules across the aqueous mucus. Here, we report its crystallographic analysis at 2.6 Å resolution. OBPIIa is a monomeric protein that exhibits the classical lipocalin fold with a conserved eight-stranded β-barrel harboring a remarkably large hydrophobic pocket. Basic residues within the four loops that shape the entrance to this ligand-binding site evoke a positive electrostatic potential. Human OBPIIa shows distinct features compared with other mammalian OBPs, including a potentially reactive Cys side chain within its pocket similar to human tear lipocalin.

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