4RNJ image
Deposition Date 2014-10-24
Release Date 2014-11-19
Last Version Date 2023-09-20
Entry Detail
PDB ID:
4RNJ
Keywords:
Title:
PaMorA phosphodiesterase domain, apo form
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.32 Å
R-Value Free:
0.25
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Motility regulator
Gene (Uniprot):morA
Chain IDs:A, B
Chain Length:286
Number of Molecules:2
Biological Source:Pseudomonas aeruginosa PAO1
Primary Citation
Formation and dimerization of the phosphodiesterase active site of the Pseudomonas aeruginosa MorA, a bi-functional c-di-GMP regulator.
Febs Lett. 588 4631 4636 (2014)
PMID: 25447517 DOI: 10.1016/j.febslet.2014.11.002

Abstact

Diguanylate cyclases (DGC) and phosphodiesterases (PDE), respectively synthesise and hydrolyse the secondary messenger cyclic dimeric GMP (c-di-GMP), and both activities are often found in a single protein. Intracellular c-di-GMP levels in turn regulate bacterial motility, virulence and biofilm formation. We report the first structure of a tandem DGC-PDE fragment, in which the catalytic domains are shown to be active. Two phosphodiesterase states are distinguished by active site formation. The structures, in the presence or absence of c-di-GMP, suggest that dimerisation and binding pocket formation are linked, with dimerisation being required for catalytic activity. An understanding of PDE activation is important, as biofilm dispersal via c-di-GMP hydrolysis has therapeutic effects on chronic infections.

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