4RH4 image
Deposition Date 2014-10-01
Release Date 2015-01-14
Last Version Date 2024-02-28
Entry Detail
PDB ID:
4RH4
Title:
Zinc-substituted pseudoazurin solved by S/Zn-SAD phasing
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.60 Å
R-Value Free:
0.20
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 65
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Pseudoazurin
Chain IDs:A
Chain Length:123
Number of Molecules:1
Biological Source:Alcaligenes faecalis
Primary Citation
Zinc-substituted pseudoazurin solved by S/Zn-SAD phasing.
Acta Crystallogr F Struct Biol Commun 71 19 23 (2015)
PMID: 25615962 DOI: 10.1107/S2053230X14025552

Abstact

The copper(II) centre of the blue copper protein pseudoazurin from Alcaligenes faecalis has been substituted by zinc(II) via denaturing the protein, chelation and removal of copper and refolding the apoprotein, followed by the addition of an aqueous solution of ZnCl2. Vapour-diffusion experiments produced colourless hexagonal crystals (space group P65), which when cryocooled had unit-cell parameters a=b=49.01, c=98.08 Å. Diffraction data collected at 100 K using a copper sealed tube were phased by the weak anomalous signal of five S atoms and one Zn atom. The structure was fitted manually and refined to 1.6 Å resolution. The zinc-substituted protein exhibits similar overall geometry to the native structure with copper. Zn2+ binds more strongly to its four ligand atoms (His40 Nδ1, Cys78 Sγ, His81 Nδ1 and Met86 Sδ) and retains the tetrahedral arrangement, although the structure is less distorted than the native copper protein.

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