4RDQ image
Deposition Date 2014-09-19
Release Date 2014-10-22
Last Version Date 2024-11-20
Entry Detail
PDB ID:
4RDQ
Title:
Calcium-activated chloride channel bestrophin-1, from chicken, in complex with Fab antibody fragments, chloride and calcium
Biological Source:
Source Organism:
Gallus gallus (Taxon ID: 9031)
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.85 Å
R-Value Free:
0.23
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Bestrophin-1
Chain IDs:A, B, C, D, E
Chain Length:409
Number of Molecules:5
Biological Source:Gallus gallus
Polymer Type:polypeptide(L)
Molecule:Fab antibody fragment, light chain
Chain IDs:F, H, J, L, N
Chain Length:212
Number of Molecules:5
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:Fab antibody fragment, heavy chain
Chain IDs:G, I, K, M, O
Chain Length:217
Number of Molecules:5
Biological Source:Mus musculus
Primary Citation
Structure and insights into the function of a Ca(2+)-activated Cl(-) channel.
Nature 516 213 218 (2014)
PMID: 25337878 DOI: 10.1038/nature13913

Abstact

Bestrophin calcium-activated chloride channels (CaCCs) regulate the flow of chloride and other monovalent anions across cellular membranes in response to intracellular calcium (Ca(2+)) levels. Mutations in bestrophin 1 (BEST1) cause certain eye diseases. Here we present X-ray structures of chicken BEST1-Fab complexes, at 2.85 Å resolution, with permeant anions and Ca(2+). Representing, to our knowledge, the first structure of a CaCC, the eukaryotic BEST1 channel, which recapitulates CaCC function in liposomes, is formed from a pentameric assembly of subunits. Ca(2+) binds to the channel's large cytosolic region. A single ion pore, approximately 95 Å in length, is located along the central axis and contains at least 15 binding sites for anions. A hydrophobic neck within the pore probably forms the gate. Phenylalanine residues within it may coordinate permeating anions via anion-π interactions. Conformational changes observed near the 'Ca(2+) clasp' hint at the mechanism of Ca(2+)-dependent gating. Disease-causing mutations are prevalent within the gating apparatus.

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Primary Citation of related structures