4RDN image
Deposition Date 2014-09-19
Release Date 2014-12-24
Last Version Date 2024-02-28
Entry Detail
PDB ID:
4RDN
Keywords:
RNA BINDING PROTEIN
Title:
Structure of YTH-YTHDF2 in complex with m6A
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.10 Å
R-Value Free:
0.26
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 65
4RDN validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:YTH domain-containing family protein 2
Gene (Uniprot):YTHDF2
Chain IDs:A, B
Chain Length:167
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:Q9Y5A9 Pfam ID:PF04146
Ligand Molecules
6MD
SO4
Primary Citation
Structure of the YTH domain of human YTHDF2 in complex with an m(6)A mononucleotide reveals an aromatic cage for m(6)A recognition.
Cell Res. 24 1490 1492 (2014)
PMID: 25412658 DOI: 10.1038/cr.2014.153
Primary Citation of related structures
4RDO