4RCD image
Entry Detail
PDB ID:
4RCD
Title:
Crystal structure of BACE1 in complex with a 2-aminooxazoline 4-azaxanthene inhibitor
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2014-09-15
Release Date:
2015-01-21
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 61 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Beta-secretase 1
Mutations:R(-5)K, R(-4)K
Chain IDs:A
Chain Length:411
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Inhibitors of beta-Site Amyloid Precursor Protein Cleaving Enzyme (BACE1): Identification of (S)-7-(2-Fluoropyridin-3-yl)-3-((3-methyloxetan-3-yl)ethynyl)-5'H-spiro[chromeno[2,3-b]pyridine-5,4'-oxazol]-2'-amine (AMG-8718).
J.Med.Chem. 57 9811 9831 (2014)
PMID: 25363711 DOI: 10.1021/jm5012676

Abstact

We have previously shown that the aminooxazoline xanthene scaffold can generate potent and orally efficacious BACE1 inhibitors although certain of these compounds exhibited potential hERG liabilities. In this article, we describe 4-aza substitution on the xanthene core as a means to increase BACE1 potency while reducing hERG binding affinity. Further optimization of the P3 and P2' side chains resulted in the identification of 42 (AMG-8718), a compound with a balanced profile of BACE1 potency, hERG binding affinity, and Pgp recognition. This compound produced robust and sustained reductions of CSF and brain Aβ levels in a rat pharmacodynamic model and exhibited significantly reduced potential for QTc elongation in a cardiovascular safety model.

Legend

Protein

Chemical

Disease

Primary Citation of related structures