4R6B image
Deposition Date 2014-08-23
Release Date 2015-02-04
Last Version Date 2024-10-30
Entry Detail
PDB ID:
4R6B
Title:
Rational Design of Enhanced Photoresistance in a Photoswitchable Fluorescent Protein
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Green to red photoconvertible GFP-like protein EosFP
Mutagens:M159A, F173S, F191L
Chain IDs:A, B, C, D
Chain Length:232
Number of Molecules:4
Biological Source:Lobophyllia hemprichii
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CR8 A HIS ?
Primary Citation
Rational design of enhanced photoresistance in a photoswitchable fluorescent protein.
Methods Appl Fluoresc 3 014004 014004 (2015)
PMID: 29148481 DOI: 10.1088/2050-6120/3/1/014004

Abstact

Fluorescent proteins are particularly susceptible to photobleaching, the permanent loss of fluorescence emission resulting from photodestruction of the chromophore. In the case of Reversibly Switchable Fluorescent Proteins (RSFPs), which can be switched back and forth between a non-fluorescent and a fluorescent state, the achievable number of switching cycles is limited by photobleaching, a process known as photofatigue. Photofatigue has become a crucial limitation in a number of advanced applications based on repeated photoswitching of RSFPs, notably in the field of super-resolution fluorescence microscopy. Here, based on our previous structural investigation of photobleaching mechanisms in IrisFP, an RSFP also capable of green-to-red photoconversion, we present the rational design of a single-mutant IrisFP-M159A that displays considerably enhanced photostability. The results suggest that, under moderate illumination intensities, photobleaching of IrisFP-like Anthozoan fluorescent proteins such as EosFP, Dendra or Dronpa derivatives is mainly driven by an oxygen-dependent mechanism resulting in the irreversible sulfoxidation of methionine 159. The photofatigue decay profiles of IrisFP and its photoresistant mutant IrisFP-M159A were investigated in different experimental conditions, in vitro and in cellulo. Although the performance of the mutant was found to be always superior, the results showed switching behaviors strongly dependent on the nanoenvironment. Thus, in general, assessment of photostability and switching properties of RSFPs should be carried out in real experimental conditions.

Legend

Protein

Chemical

Disease

Primary Citation of related structures