4R0G image
Deposition Date 2014-07-31
Release Date 2015-04-15
Last Version Date 2024-03-20
Entry Detail
PDB ID:
4R0G
Title:
Crystal structure of Lpg0393 from Legionella pneumophila
Biological Source:
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Uncharacterized protein
Gene (Uniprot):lpg0393
Chain IDs:A, B, C, D
Chain Length:287
Number of Molecules:4
Biological Source:Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Ligand Molecules
Primary Citation
Lpg0393 of Legionella pneumophila Is a Guanine-Nucleotide Exchange Factor for Rab5, Rab21 and Rab22
Plos One 10 e0118683 e0118683 (2015)
PMID: 25821953 DOI: 10.1371/journal.pone.0118683

Abstact

Legionella pneumophila, a human intracellular pathogen, encodes about 290 effector proteins that are translocated into host cells through a secretion machinery. Some of these proteins have been shown to manipulate or subvert cellular processes during infection, but functional roles of a majority of them remain unknown. Lpg0393 is a newly identified Legionella effector classified as a hypothetical protein. Through X-ray crystallographic analysis, we show that Lpg0393 contains a Vps9-like domain, which is structurally most similar to the catalytic core of human Rabex-5 that activates the endosomal Rab proteins Rab5, Rab21 and Rab22. Consistently, Lpg0393 exhibited a guanine-nucleotide exchange factor activity toward the endosomal Rabs. This work identifies the first example of a bacterial guanine-nucleotide exchange factor that is active towards the Rab5 sub-cluster members, implying that the activation of these Rab proteins might be advantageous for the intracellular survival of Legionella.

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Primary Citation of related structures