4QIM image
Deposition Date 2014-05-31
Release Date 2014-07-23
Last Version Date 2024-10-16
Entry Detail
PDB ID:
4QIM
Title:
Structure of the human smoothened receptor in complex with ANTA XV
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Escherichia coli (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.61 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 21 21 21
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Smoothened homolog/Soluble cytochrome b562 chimeric protein
Gene (Uniprot):cybC, SMO
Mutagens:M1007W, H1102I, R1106L
Chain IDs:A
Chain Length:468
Number of Molecules:1
Biological Source:Homo sapiens, Escherichia coli
Primary Citation
Structural basis for Smoothened receptor modulation and chemoresistance to anticancer drugs.
Nat Commun 5 4355 4355 (2014)
PMID: 25008467 DOI: 10.1038/ncomms5355

Abstact

The Smoothened receptor (SMO) mediates signal transduction in the hedgehog pathway, which is implicated in normal development and carcinogenesis. SMO antagonists can suppress the growth of some tumours; however, mutations at SMO have been found to abolish their antitumour effects, a phenomenon known as chemoresistance. Here we report three crystal structures of human SMO bound to the antagonists SANT1 and Anta XV, and the agonist, SAG1.5, at 2.6-2.8 Å resolution. The long and narrow cavity in the transmembrane domain of SMO harbours multiple ligand binding sites, where SANT1 binds at a deeper site as compared with other ligands. Distinct interactions at D473(6.54f) elucidated the structural basis for the differential effects of chemoresistance mutations on SMO antagonists. The agonist SAG1.5 induces a conformational rearrangement of the binding pocket residues, which could contribute to SMO activation. Collectively, these studies reveal the structural basis for the modulation of SMO by small molecules.

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Primary Citation of related structures
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