4Q8F image
Entry Detail
PDB ID:
4Q8F
Keywords:
Title:
Human DNA polymerase eta extending primer immediately after a phenanthriplatin adducted G
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2014-04-26
Release Date:
2014-07-02
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 61
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:DNA polymerase eta
Chain IDs:A
Chain Length:435
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polydeoxyribonucleotide
Description:5'-D(*AP*GP*TP*GP*TP*GP*AP*C)-3'
Chain IDs:C (auth: P)
Chain Length:8
Number of Molecules:1
Biological Source:
Polymer Type:polydeoxyribonucleotide
Description:5'-D(*CP*AP*TP*CP*GP*TP*CP*AP*CP*AP*CP*T)-3'
Chain IDs:B (auth: T)
Chain Length:11
Number of Molecules:1
Biological Source:
Primary Citation
Structural and mechanistic studies of polymerase eta bypass of phenanthriplatin DNA damage.
Proc.Natl.Acad.Sci.USA 111 9133 9138 (2014)
PMID: 24927576 DOI: 10.1073/pnas.1405739111

Abstact

Platinum drugs are a mainstay of anticancer chemotherapy. Nevertheless, tumors often display inherent or acquired resistance to platinum-based treatments, prompting the search for new compounds that do not exhibit cross-resistance with current therapies. Phenanthriplatin, cis-diamminephenanthridinechloroplatinum(II), is a potent monofunctional platinum complex that displays a spectrum of activity distinct from those of the clinically approved platinum drugs. Inhibition of RNA polymerases by phenanthriplatin lesions has been implicated in its mechanism of action. The present study evaluates the ability of phenanthriplatin lesions to inhibit DNA replication, a function disrupted by traditional platinum drugs. Phenanthriplatin lesions effectively inhibit DNA polymerases ν, ζ, and κ and the Klenow fragment. In contrast to results obtained with DNA damaged by cisplatin, all of these polymerases were capable of inserting a base opposite a phenanthriplatin lesion, but only Pol η, an enzyme efficient in translesion synthesis, was able to fully bypass the adduct, albeit with low efficiency. X-ray structural characterization of Pol η complexed with site-specifically platinated DNA at both the insertion and +1 extension steps reveals that phenanthriplatin on DNA interacts with and inhibits Pol η in a manner distinct from that of cisplatin-DNA adducts. Unlike cisplatin and oxaliplatin, the efficacies of which are influenced by Pol η expression, phenanthriplatin is highly toxic to both Pol η+ and Pol η- cells. Given that increased expression of Pol η is a known mechanism by which cells resist cisplatin treatment, phenanthriplatin may be valuable in the treatment of cancers that are, or can easily become, resistant to cisplatin.

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