4PMT image
Entry Detail
PDB ID:
4PMT
Title:
The structure of TrkA kinase bound to the inhibitor N~4~-(4-morpholin-4-ylphenyl)-N~6~-(pyridin-3-ylmethyl)pyrido[3,2-d]pyrimidine-4,6-diamine
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2014-05-22
Release Date:
2014-06-18
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.20
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 64
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:High affinity nerve growth factor receptor
Chain IDs:A
Chain Length:291
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Maximizing diversity from a kinase screen: identification of novel and selective pan-Trk inhibitors for chronic pain.
J.Med.Chem. 57 5800 5816 (2014)
PMID: 24914455 DOI: 10.1021/jm5006429

Abstact

We have identified several series of small molecule inhibitors of TrkA with unique binding modes. The starting leads were chosen to maximize the structural and binding mode diversity derived from a high throughput screen of our internal compound collection. These leads were optimized for potency and selectivity employing a structure based drug design approach adhering to the principles of ligand efficiency to maximize binding affinity without overly relying on lipophilic interactions. This endeavor resulted in the identification of several small molecule pan-Trk inhibitor series that exhibit high selectivity for TrkA/B/C versus a diverse panel of kinases. We have also demonstrated efficacy in both inflammatory and neuropathic pain models upon oral dosing. Herein we describe the identification process, hit-to-lead progression, and binding profiles of these selective pan-Trk kinase inhibitors.

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