4PMQ image
Entry Detail
PDB ID:
4PMQ
Title:
Crystal structure of the Mycobacterium tuberculosis Tat-secreted protein Rv2525c in complex with L-tartrate (orthorhombic crystal form)
Biological Source:
PDB Version:
Deposition Date:
2014-05-22
Release Date:
2014-10-08
Method Details:
Experimental Method:
Resolution:
1.61 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Tat-secreted protein Rv2525c
Chain IDs:A
Chain Length:206
Number of Molecules:1
Biological Source:Mycobacterium tuberculosis
Primary Citation
Structural studies suggest a peptidoglycan hydrolase function for the Mycobacterium tuberculosis Tat-secreted protein Rv2525c.
J.Struct.Biol. 188 156 164 (2014)
PMID: 25260828 DOI: 10.1016/j.jsb.2014.09.003

Abstact

Among the few proteins shown to be secreted by the Tat system in Mycobacterium tuberculosis, Rv2525c is of particular interest, since its gene is conserved in the minimal genome of Mycobacterium leprae. Previous evidence linked this protein to cell wall metabolism and sensitivity to β-lactams. We describe here the crystal structure of Rv2525c that shows a TIM barrel-like fold characteristic of glycoside hydrolases of the GH25 family, which includes prokaryotic and phage-encoded peptidoglycan hydrolases. Structural comparison with other members of this family combined with substrate docking suggest that, although the 'neighbouring group' catalytic mechanism proposed for this family still appears as the most plausible, the identity of residues involved in catalysis in GH25 hydrolases might need to be revised.

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