4PKH image
Deposition Date 2014-05-14
Release Date 2014-07-30
Last Version Date 2023-09-27
Entry Detail
PDB ID:
4PKH
Title:
Complex of ADP-actin With the N-terminal Actin-Binding Domain of Tropomodulin
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.15 Å
R-Value Free:
0.32
R-Value Work:
0.27
R-Value Observed:
0.27
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Actin, alpha skeletal muscle
Gene (Uniprot):ACTA1
Chain IDs:A, C (auth: D), E (auth: F), G (auth: I)
Chain Length:377
Number of Molecules:4
Biological Source:Oryctolagus cuniculus
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Gelsolin,Tropomodulin-1 chimera
Gene (Uniprot):GSN, TMOD1
Chain IDs:B, D (auth: E), F (auth: G), H (auth: J)
Chain Length:186
Number of Molecules:4
Biological Source:Homo sapiens
Primary Citation
Actin cytoskeleton. Mechanism of actin filament pointed-end capping by tropomodulin.
Science 345 463 467 (2014)
PMID: 25061212 DOI: 10.1126/science.1256159

Abstact

Proteins that cap the ends of the actin filament are essential regulators of cytoskeleton dynamics. Whereas several proteins cap the rapidly growing barbed end, tropomodulin (Tmod) is the only protein known to cap the slowly growing pointed end. The lack of structural information severely limits our understanding of Tmod's capping mechanism. We describe crystal structures of actin complexes with the unstructured amino-terminal and the leucine-rich repeat carboxy-terminal domains of Tmod. The structures and biochemical analysis of structure-inspired mutants showed that one Tmod molecule interacts with three actin subunits at the pointed end, while also contacting two tropomyosin molecules on each side of the filament. We found that Tmod achieves high-affinity binding through several discrete low-affinity interactions, which suggests a mechanism for controlled subunit exchange at the pointed end.

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Primary Citation of related structures