4PE5 image
Deposition Date 2014-04-22
Release Date 2014-06-04
Last Version Date 2024-11-06
Entry Detail
PDB ID:
4PE5
Title:
Crystal Structure of GluN1a/GluN2B NMDA Receptor Ion Channel
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.96 Å
R-Value Free:
0.29
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Glutamate receptor ionotropic, NMDA 1
Gene (Uniprot):Grin1
Mutations:N61Q, N239D, N350Q, N471Q, N491Q, T561C, E594Q, E595S, E597S, E598T, N771Q, F810C, R844N, R845G, K846A
Chain IDs:A, C
Chain Length:825
Number of Molecules:2
Biological Source:Rattus norvegicus
Polymer Type:polypeptide(L)
Molecule:Glutamate receptor ionotropic, NMDA 2B
Gene (Uniprot):Grin2b
Mutations:S214C, N348D, D557C, C588S, I815C, C838S, C849S, del(C395), del(P396), del(E397), del(E399), del(E400), del(E402)
Chain IDs:B, D
Chain Length:820
Number of Molecules:2
Biological Source:Rattus norvegicus
Primary Citation
Crystal structure of a heterotetrameric NMDA receptor ion channel.
Science 344 992 997 (2014)
PMID: 24876489 DOI: 10.1126/science.1251915

Abstact

N-Methyl-D-aspartate (NMDA) receptors belong to the family of ionotropic glutamate receptors, which mediate most excitatory synaptic transmission in mammalian brains. Calcium permeation triggered by activation of NMDA receptors is the pivotal event for initiation of neuronal plasticity. Here, we show the crystal structure of the intact heterotetrameric GluN1-GluN2B NMDA receptor ion channel at 4 angstroms. The NMDA receptors are arranged as a dimer of GluN1-GluN2B heterodimers with the twofold symmetry axis running through the entire molecule composed of an amino terminal domain (ATD), a ligand-binding domain (LBD), and a transmembrane domain (TMD). The ATD and LBD are much more highly packed in the NMDA receptors than non-NMDA receptors, which may explain why ATD regulates ion channel activity in NMDA receptors but not in non-NMDA receptors.

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Primary Citation of related structures