ISDA

Deposition Date 2014-04-17

Release Date 2014-05-21

Last Version Date 2024-10-30

Entry Detail

PDB ID:

4PDC

Keywords:

IMMUNE SYSTEM/VIRAL PROTEIN

Title:

Crystal structure of Cowpox virus CPXV018 (OMCP) bound to human NKG2D

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)
Cowpox virus (Taxon ID: 10243)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.99 Å

R-Value Free:

0.21

R-Value Work:

0.16

R-Value Observed:

0.16

Space Group:

P 1 21 1

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:NKG2-D type II integral membrane protein
Gene (Uniprot):KLRK1
Chain IDs:A, B, C, D
Chain Length:123
Number of Molecules:4
Biological Source:Homo sapiens

UniProt ID:P26718 Pfam ID:PF00059

Protein Blast

Polymer Type:polypeptide(L)
Molecule:CPXV018 protein
Gene (Uniprot):CPXV018 CDS
Mutations:Y23D, F95D
Chain IDs:E, F
Chain Length:150
Number of Molecules:2
Biological Source:Cowpox virus

UniProt ID:Q8QN43

Primary Citation

Structural basis of cowpox evasion of NKG2D immunosurveillance

Lazear, E, Sun, M.M, Wang, X, Geurs, T.L, Nelson, C.A, Campbell, J.A, Lippold, D, Krupnick, A.S, Davis, R.S, Carayannopoulos, L.N, French, A.R, Fremont, D.H.Show

Biorxiv ? ? ? (2019)

DOI: 10.1101/796862

Primary Citation of related structures