4PC4 image
Deposition Date 2014-04-14
Release Date 2015-03-04
Last Version Date 2024-11-13
Entry Detail
PDB ID:
4PC4
Title:
Bombyx mori lipoprotein 6
Biological Source:
Source Organism:
Bombyx mori (Taxon ID: 7091)
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:30K lipoprotein
Gene (Uniprot):693045
Chain IDs:A, B, C, D, E
Chain Length:245
Number of Molecules:5
Biological Source:Bombyx mori
Primary Citation
Crystal structure of Bombyx mori lipoprotein 6: comparative structural analysis of the 30-kDa lipoprotein family.
Plos One 9 e108761 e108761 (2014)
PMID: 25379889 DOI: 10.1371/journal.pone.0108761

Abstact

The 30-kDa lipoprotein (LP) family of mulberry silkworm comprises major hemolymph proteins specific to the fifth instar larvae. The family consists of 46 members, 24 of which are referred to as typical 30-kDa LPs. To date, two crystal structures of 30-kDa LPs from Bombyx mori have been described (Bmlp3 and Bmlp7). Here, we present the crystal structure of Bmlp6, another 30-kDa LP member. Bmlp6 is comprised of two domains characteristic of this family, the VHS-type N-terminal domain and β-trefoil C-terminal domain. The structures of the three 30-kDa LPs have been compared and a number of differences are noted, including loop conformation, the surface electrostatic potential, and the potential binding cavities. We discuss the observed structural differences in the light of the potential different roles of the particular 30-kDa LP members in silkworm physiology.

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Primary Citation of related structures