4PA0 image
Deposition Date 2014-04-06
Release Date 2015-07-08
Last Version Date 2024-10-16
Entry Detail
PDB ID:
4PA0
Title:
Omecamtiv Mercarbil binding site on the Human Beta-Cardiac Myosin Motor Domain
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Aequorea victoria (Taxon ID: 6100)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.25 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Myosin-7,Green fluorescent protein
Gene (Uniprot):MYH7, GFP
Mutations:Q80R, V163A, I167T, S175G, D190N
Chain IDs:A, B
Chain Length:1026
Number of Molecules:2
Biological Source:Homo sapiens, Aequorea victoria
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CRO A GLY chromophore
Primary Citation
Structural basis for drug-induced allosteric changes to human beta-cardiac myosin motor activity.
Nat Commun 6 7974 7974 (2015)
PMID: 26246073 DOI: 10.1038/ncomms8974

Abstact

Omecamtiv Mecarbil (OM) is a small molecule allosteric effector of cardiac myosin that is in clinical trials for treatment of systolic heart failure. A detailed kinetic analysis of cardiac myosin has shown that the drug accelerates phosphate release by shifting the equilibrium of the hydrolysis step towards products, leading to a faster transition from weak to strong actin-bound states. The structure of the human β-cardiac motor domain (cMD) with OM bound reveals a single OM-binding site nestled in a narrow cleft separating two domains of the human cMD where it interacts with the key residues that couple lever arm movement to the nucleotide state. In addition, OM induces allosteric changes in three strands of the β-sheet that provides the communication link between the actin-binding interface and the nucleotide pocket. The OM-binding interactions and allosteric changes form the structural basis for the kinetic and mechanical tuning of cardiac myosin.

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Primary Citation of related structures