4P96 image
Entry Detail
PDB ID:
4P96
Keywords:
Title:
FadR, Fatty Acid Responsive Transcription Factor from Vibrio cholerae
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2014-04-02
Release Date:
2015-02-04
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 41
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Fatty acid metabolism regulator protein
Chain IDs:A, B
Chain Length:279
Number of Molecules:2
Biological Source:Vibrio cholerae HC-21A1
Primary Citation
The 40-residue insertion in Vibrio cholerae FadR facilitates binding of an additional fatty acyl-CoA ligand.
Nat Commun 6 6032 6032 (2015)
PMID: 25607896 DOI: 10.1038/ncomms7032

Abstact

FadR is a master regulator of fatty acid metabolism and influences virulence in certain members of Vibrionaceae. Among FadR homologues of the GntR family, the Vibrionaceae protein is unusual in that it contains a C-terminal 40-residue insertion. Here we report the structure of Vibrio cholerae FadR (VcFadR) alone, bound to DNA, and in the presence of a ligand, oleoyl-CoA. Whereas Escherichia coli FadR (EcFadR) contains only one acyl-CoA-binding site in each monomer, crystallographic and calorimetric data indicate that VcFadR has two. One of the binding sites resembles that of EcFadR, whereas the other, comprised residues from the insertion, has not previously been observed. Upon ligand binding, VcFadR undergoes a dramatic conformational change that would more fully disrupt DNA binding than EcFadR. These findings suggest that the ability to bind and respond to an additional ligand allows FadR from Vibrionaceae to function as a more efficient regulator.

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Primary Citation of related structures