4OZH image
Entry Detail
PDB ID:
4OZH
Keywords:
Title:
S16 protein complex
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2014-02-16
Release Date:
2014-04-16
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.24
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:HLA class II histocompatibility antigen, DQ alpha 1 chain
Chain IDs:A, C
Chain Length:191
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:HLA class II histocompatibility antigen, DQ beta 1 chain
Chain IDs:B, D
Chain Length:213
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:T-cell receptor, s16, alpha chain
Mutations:T176C
Chain IDs:E, G
Chain Length:203
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:T-cell receptor, s16, beta chain
Mutations:C202A, S184C
Chain IDs:F, H
Chain Length:241
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Gliadin-alpha2 peptide
Chain IDs:I, J
Chain Length:13
Number of Molecules:2
Biological Source:Triticum aestivum
Primary Citation
T-cell receptor recognition of HLA-DQ2-gliadin complexes associated with celiac disease.
Nat.Struct.Mol.Biol. 21 480 488 (2014)
PMID: 24777060 DOI: 10.1038/nsmb.2817

Abstact

Celiac disease is a T cell-mediated disease induced by dietary gluten, a component of which is gliadin. 95% of individuals with celiac disease carry the HLA (human leukocyte antigen)-DQ2 locus. Here we determined the T-cell receptor (TCR) usage and fine specificity of patient-derived T-cell clones specific for two epitopes from wheat gliadin, DQ2.5-glia-α1a and DQ2.5-glia-α2. We determined the ternary structures of four distinct biased TCRs specific for those epitopes. All three TCRs specific for DQ2.5-glia-α2 docked centrally above HLA-DQ2, which together with mutagenesis and affinity measurements provided a basis for the biased TCR usage. A non-germline encoded arginine residue within the CDR3β loop acted as the lynchpin within this common docking footprint. Although the TCRs specific for DQ2.5-glia-α1a and DQ2.5-glia-α2 docked similarly, their interactions with the respective gliadin determinants differed markedly, thereby providing a basis for epitope specificity.

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Protein

Chemical

Disease

Primary Citation of related structures