4ON9 image
Entry Detail
PDB ID:
4ON9
Keywords:
Title:
DECH box helicase domain
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2014-01-28
Release Date:
2014-07-02
Method Details:
Experimental Method:
Resolution:
2.71 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.22
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Probable ATP-dependent RNA helicase DDX58
Chain IDs:A, B
Chain Length:580
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Crystal and solution structure of the human RIG-I SF2 domain
Acta Crystallogr.,Sect.F 70 1027 1031 (2014)
PMID: 25084375 DOI: 10.1107/S2053230X14012230

Abstact

RIG-I is a pathogen-recognition receptor that recognizes viral 5'-triphosphates carrying double-stranded RNA. Upon binding to these microbe-associated molecular patterns (MAMPs), RIG-I forms oligomers and promotes downstream processes that result in type I interferon production and induction of an antiviral state. Here, the crystal structure of the human RIG-I superfamily 2 ATPase domain crystallized in an unusually elongated and open conformation is reported. The elongated structure is probably induced in part by crystal packing, but nevertheless indicates that the domain is intrinsically very flexible. This flexibility might allow substantial structural changes upon substrate binding and oligomerization.

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