4OK9 image
Entry Detail
PDB ID:
4OK9
Title:
Crystal structure of the single-stranded RNA binding protein HutP from Geobacillus thermodenitrificans
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2014-01-22
Release Date:
2014-03-19
Method Details:
Experimental Method:
Resolution:
1.91 Å
R-Value Free:
0.23
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 63
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Hut operon positive regulatory protein
Chain IDs:A, B
Chain Length:149
Number of Molecules:2
Biological Source:Geobacillus thermodenitrificans
Primary Citation
Crystal structure of the single-stranded RNA binding protein HutP from Geobacillus thermodenitrificans
Biochem.Biophys.Res.Commun. 446 945 951 (2014)
PMID: 24650662 DOI: 10.1016/j.bbrc.2014.03.036

Abstact

RNA binding proteins control gene expression by the attenuation/antitermination mechanism. HutP is an RNA binding antitermination protein. It regulates the expression of hut operon when it binds with RNA by modulating the secondary structure of single-stranded hut mRNA. HutP necessitates the presence of l-histidine and divalent metal ion to bind with RNA. Herein, we report the crystal structures of ternary complex (HutP-l-histidine-Mg(2+)) and EDTA (0.5 M) treated ternary complex (HutP-l-histidine-Mg(2+)), solved at 1.9 Å and 2.5 Å resolutions, respectively, from Geobacillus thermodenitrificans. The addition of 0.5 M EDTA does not affect the overall metal-ion mediated ternary complex structure and however, the metal ions at the non-specific binding sites are chelated, as evidenced from the results of structural features.

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