4NW7 image
Deposition Date 2013-12-05
Release Date 2014-10-15
Last Version Date 2024-02-28
Entry Detail
PDB ID:
4NW7
Title:
PDE4 catalytic domain
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.15 Å
R-Value Free:
0.20
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 42
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:cAMP-specific 3',5'-cyclic phosphodiesterase 4B
Gene (Uniprot):PDE4B
Chain IDs:A
Chain Length:372
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Discovery of triazines as selective PDE4B versus PDE4D inhibitors.
Bioorg.Med.Chem.Lett. 24 4031 4034 (2014)
PMID: 24998378 DOI: 10.1016/j.bmcl.2014.06.002

Abstact

In this study we report a series of triazine derivatives that are potent inhibitors of PDE4B. We also provide a series of structure activity relationships that demonstrate the triazine core can be used to generate subtype selective inhibitors of PDE4B versus PDE4D. A high resolution co-crystal structure shows that the inhibitors interact with a C-terminal regulatory helix (CR3) locking the enzyme in an inactive 'closed' conformation. The results show that the compounds interact with both catalytic domain and CR3 residues. This provides the first structure-based approach to engineer PDE4B-selective inhibitors.

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Primary Citation of related structures