4NRL image
Deposition Date 2013-11-26
Release Date 2014-03-12
Last Version Date 2024-10-30
Entry Detail
PDB ID:
4NRL
Keywords:
Title:
Structure of hemagglutinin with F95Y mutation of influenza virus B/Lee/40
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.72 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin HA1 chain
Gene (Uniprot):HA
Mutations:F95Y
Chain IDs:A, C, E
Chain Length:346
Number of Molecules:3
Biological Source:Influenza B virus
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin HA2 chain
Gene (Uniprot):HA
Chain IDs:B, D, F
Chain Length:182
Number of Molecules:3
Biological Source:Influenza B virus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN E ASN GLYCOSYLATION SITE
Ligand Molecules
Primary Citation
The roles of hemagglutinin Phe-95 in receptor binding and pathogenicity of influenza B virus.
Virology 450-451 71 83 (2014)
PMID: 24503069 DOI: 10.1016/j.virol.2013.11.038

Abstact

Diverged ~4000 years ago, influenza B virus has several important differences from influenza A virus, including lower receptor-binding affinity and highly restricted host range. Based on our prior structural studies, we hypothesized that a single-residue difference in the receptor-binding site of hemagglutinin (HA), Phe-95 in influenza B virus versus Tyr-98 in influenza A/H1-H15, is possibly a key determinant for the low receptor-binding affinity. Here we demonstrate that the mutation Phe95→Tyr in influenza B virus HA restores all three hydrogen bonds made by Tyr-98 in influenza A/H1-15 HA and has the potential to enhance receptor binding. However, the full realization of this potential is influenced by the local environment into which the mutation is introduced. The binding and replication of the recombinant viruses correlate well with the receptor-binding capabilities of HA. These results are discussed in relation to the roles of Phe-95 in receptor binding and pathogenicity of influenza B virus.

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Primary Citation of related structures