4NRA image
Deposition Date 2013-11-26
Release Date 2013-12-25
Last Version Date 2023-09-20
Entry Detail
PDB ID:
4NRA
Keywords:
Title:
Crystal Structure of the bromodomain of human BAZ2B in complex with compound-6 E11322
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.85 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Bromodomain adjacent to zinc finger domain protein 2B
Gene (Uniprot):BAZ2B
Chain IDs:A
Chain Length:117
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Targeting low-druggability bromodomains: fragment based screening and inhibitor design against the BAZ2B bromodomain.
J.Med.Chem. 56 10183 10187 (2013)
PMID: 24304323 DOI: 10.1021/jm401582c

Abstact

Bromodomains are epigenetic reader domains that have recently become popular targets. In contrast to BET bromodomains, which have proven druggable, bromodomains from other regions of the phylogenetic tree have shallower pockets. We describe successful targeting of the challenging BAZ2B bromodomain using biophysical fragment screening and structure-based optimization of high ligand-efficiency fragments into a novel series of low-micromolar inhibitors. Our results provide attractive leads for development of BAZ2B chemical probes and indicate the whole family may be tractable.

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